RNA–Protein interactions for RNA: ENST00000544693.5

NPIPB4-220, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 4

Gene NPIPB4, Length 400 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-220ENST00000544693 RETREG3Q86VR2 466 aa6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 USP38Q8NB14 1042 aa6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 CYP2W1Q8TAV3 490 aa6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 ETNPPLQ8TBG4 499 aa6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 LENG9Q96B70 501 aa6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 AIFM3Q96NN9 605 aa6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 MAP7D2Q96T17 732 aa6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 GDF15Q99988 308 aa6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 NOC4LQ9BVI4 516 aaKnown RBP6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 ZSCAN16Q9H4T2 348 aaPredicted RBP6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 IL23AQ9NPF7 189 aa6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 HDAC6Q9UBN7 1215 aa6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 MAFBQ9Y5Q3 323 aaPredicted RBP6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 SQORQ9Y6N5 450 aa6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 TET1Q8NFU7 2136 aa6.8□□□□□ -1.32
NPIPB4-220ENST00000544693 GSTTP1A0A1W2PQM5 241 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 DDX39AO00148 427 aaKnown RBP6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 DHX15O43143 795 aaKnown RBP6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 SLC26A4O43511 780 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 CHMP2AO43633 222 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 TDP2O95551 362 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 SYN1P17600 705 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 PRPHP41219 470 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 QARSP47897 775 aaKnown RBP6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 PSMC5P62195 406 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 MDM2Q00987 491 aaPredicted RBP6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 NR5A1Q13285 461 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 GRIK4Q16099 956 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 XKR3Q5GH77 459 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 TTC38Q5R3I4 469 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 TMEM63BQ5T3F8 832 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 GDF6Q6KF10 455 aaPredicted RBP6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 SWSAP1Q6NVH7 229 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 LRRC8DQ7L1W4 858 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 LMBR1Q8WVP7 490 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 SLC7A3Q8WY07 619 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 BADQ92934 168 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 TNFRSF25Q93038 417 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 CNTNAP3BQ96NU0 1288 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 CNTNAP3Q9BZ76 1288 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 PPP1R12CQ9BZL4 782 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 TRPV6Q9H1D0 765 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 RNPEPQ9H4A4 650 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 TRMT13Q9NUP7 481 aaKnown RBP6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 PTPRSQ13332 1948 aa6.79□□□□□ -1.32
NPIPB4-220ENST00000544693 GRIN2DO15399 1336 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 KDM3AQ9Y4C1 1321 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 MYO9BQ13459 2157 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 TMEM265A0A087WTH1 108 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 SMIM35A0A1B0GVV1 85 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 MBLAC1A4D2B0 266 aaPredicted RBP6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 VPS37CA5D8V6 355 aaPredicted RBP6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 TRIM43BA6NCK2 446 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 RSPH10B2B2RC85 870 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 KIF28PB7ZC32 967 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 SORBS3O60504 671 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 CCNE2O96020 404 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 FGBP02675 491 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 OR52Z1P0C646 297 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 IQCF3P0C7M6 154 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 CCNYL3P0C7X3 344 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 RSPH10BP0C881 870 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 CYP2C9P11712 490 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 CKBP12277 381 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 XRCC6P12956 609 aaKnown RBP eCLIP6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 INSRRP14616 1297 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 VARSP26640 1264 aaKnown RBP6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 MARK3P27448 753 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 MCM7P33993 719 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 THPOP40225 353 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 KCNJ6P48051 423 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 GUCY1B3Q02153 619 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 TBC1D8BQ0IIM8 1120 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 PDIA5Q14554 519 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 PLCB4Q15147 1175 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 PCBP1Q15365 356 aaKnown RBP eCLIP6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 EPHA7Q15375 998 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 LRIT3Q3SXY7 679 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 ARL6IP4Q66PJ3 421 aaKnown RBP6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 CNKSR3Q6P9H4 555 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 TRIM50Q86XT4 487 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 CCDC60Q8IWA6 550 aaPredicted RBP6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 C4orf19Q8IY42 314 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 PHOSPHO2Q8TCD6 241 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 TCP11Q8WWU5 503 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 RSPH1Q8WYR4 309 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 BAP1Q92560 729 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 SEPT8Q92599 483 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 TRIM43Q96BQ3 446 aaPredicted RBP6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 RNPC3Q96LT9 517 aaKnown RBP6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 AK8Q96MA6 479 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 SLC9A7Q96T83 725 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 FTHL17Q9BXU8 183 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 INO80BQ9C086 356 aaPredicted RBP6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 FTOQ9C0B1 505 aaKnown RBP eCLIP6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 UNC45AQ9H3U1 944 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 ZSWIM4Q9H7M6 989 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 TTC12Q9H892 705 aaPredicted RBP6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 TUFT1Q9NNX1 390 aa6.78□□□□□ -1.32
NPIPB4-220ENST00000544693 GABBR1Q9UBS5 961 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms