RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 NBPF7P0C2Y1 421 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-222ENST00000544585 VSIG8P0DPA2 414 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 SLC5A1P13866 664 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 DRD2P14416 443 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 SYN1P17600 705 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 FLT3P36888 993 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 EXOSC9Q06265 439 aaKnown RBP7.4□□□□□ -1.22
CPSF7-222ENST00000544585 TTF1Q15361 905 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-222ENST00000544585 FDX2Q6P4F2 183 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 ARMCX6Q7L4S7 300 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 BRAPQ7Z569 592 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 STRA8Q7Z7C7 330 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 ZFPM1Q8IX07 1006 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 ZGPATQ8N5A5 531 aaKnown RBP7.4□□□□□ -1.22
CPSF7-222ENST00000544585 SLC7A14Q8TBB6 771 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 PPP1R13LQ8WUF5 828 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 BTN2A2Q8WVV5 523 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 KCTD13Q8WZ19 329 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 C8orf48Q96LL4 319 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 KREMEN1Q96MU8 473 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 TRIM39Q9HCM9 518 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 PCOLCE2Q9UKZ9 415 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 DENND2AQ9ULE3 1009 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 PCDHB12Q9Y5F1 795 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 TNPO3Q9Y5L0 923 aaKnown RBP7.4□□□□□ -1.22
CPSF7-222ENST00000544585 UTYO14607 1347 aa7.4□□□□□ -1.22
CPSF7-222ENST00000544585 SPEF2Q9C093 1822 aa7.4□□□□□ -1.23
CPSF7-222ENST00000544585 SALL1Q9NSC2 1324 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 TRIM75PA6NK02 468 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 KCNH1O95259 989 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 RASGRP1O95267 797 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 CAPNS1P04632 268 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 C6orf222P0C671 652 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-222ENST00000544585 KCNJ6P48051 423 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 RGS3P49796 1198 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 TBX4P57082 545 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 COL9A3Q14050 684 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-222ENST00000544585 KIAA1211Q6ZU35 1233 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 WDR75Q8IWA0 830 aaKnown RBP7.39□□□□□ -1.23
CPSF7-222ENST00000544585 RAVER1Q8IY67 606 aaKnown RBP7.39□□□□□ -1.23
CPSF7-222ENST00000544585 FMR1NBQ8N0W7 255 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-222ENST00000544585 ARHGEF39Q8N4T4 335 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 PTPRN2Q92932 1015 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 CCDC140Q96MF4 163 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 LBHD1Q9BQE6 289 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-222ENST00000544585 OSBPL5Q9H0X9 879 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-222ENST00000544585 BICC1Q9H694 974 aaKnown RBP7.39□□□□□ -1.23
CPSF7-222ENST00000544585 CGGBP1Q9UFW8 167 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-222ENST00000544585 OTOFQ9HC10 1997 aa7.39□□□□□ -1.23
CPSF7-222ENST00000544585 RANBP2P49792 3224 aaKnown RBP7.38□□□□□ -1.23
CPSF7-222ENST00000544585 FANCIQ9NVI1 1328 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 SHISA8B8ZZ34 492 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 EYA2O00167 538 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 SHOXO15266 292 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 DLX3O60479 287 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 KATNA1O75449 491 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 EYA4O95677 639 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 COL6A1P12109 1028 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 POU3F2P20265 443 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-222ENST00000544585 CYP2B6P20813 491 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 PRDX5P30044 214 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 IGFALSP35858 605 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 SPP2Q13103 211 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 DHCR24Q15392 516 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 MAP3K21Q5TCX8 1036 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 RNF219Q5W0B1 726 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-222ENST00000544585 SPTY2D1Q68D10 685 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-222ENST00000544585 GTF2IRD2BQ6EKJ0 949 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 GTF2IRD2Q86UP8 949 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 GSTCDQ8NEC7 633 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 MAGEB10Q96LZ2 347 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-222ENST00000544585 MIPEPQ99797 713 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 GSX1Q9H4S2 264 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-222ENST00000544585 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.38□□□□□ -1.238e-6■■□□□ 11.4
CPSF7-222ENST00000544585 AS3MTQ9HBK9 375 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 SLC5A4Q9NY91 659 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 DIS3Q9Y2L1 958 aaKnown RBP7.38□□□□□ -1.23
CPSF7-222ENST00000544585 ACTL7BQ9Y614 415 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 CACNA1FO60840 1977 aa7.38□□□□□ -1.23
CPSF7-222ENST00000544585 AK9Q5TCS8 1911 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 A0A0A0MRY4 1105 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 DDTLA6NHG4 134 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-222ENST00000544585 BRINP1O60477 761 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 KPNA6O60684 536 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 PEX14O75381 377 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 TIAF1O95411 115 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 LDHCP07864 332 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 SNRPB2P08579 225 aaKnown RBP7.37□□□□□ -1.23
CPSF7-222ENST00000544585 MAPK4P31152 587 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 HOXA7P31268 230 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-222ENST00000544585 HOXC12P31275 282 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 ETV3P41162 512 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 ZNF445P59923 1031 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 MAP4K2Q12851 820 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 PPP2R5DQ14738 602 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 PPP2R5AQ15172 486 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 PCBP1Q15365 356 aaKnown RBP eCLIP7.37□□□□□ -1.23
CPSF7-222ENST00000544585 NFE2Q16621 373 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-222ENST00000544585 TREML2Q5T2D2 321 aa7.37□□□□□ -1.23
CPSF7-222ENST00000544585 LETMD1Q6P1Q0 360 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms