RNA–Protein interactions for RNA: ENST00000542765.4

LDHB-209, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-209ENST00000542765 DVL3Q92997 716 aaPredicted RBP4.87□□□□□ -1.63
LDHB-209ENST00000542765 TUBGCP5Q96RT8 1024 aa4.87□□□□□ -1.63
LDHB-209ENST00000542765 TTC1Q99614 292 aa4.87□□□□□ -1.63
LDHB-209ENST00000542765 GPR20Q99678 358 aa4.87□□□□□ -1.63
LDHB-209ENST00000542765 SEC61A2Q9H9S3 476 aa4.87□□□□□ -1.63
LDHB-209ENST00000542765 FBXO10Q9UK96 956 aa4.87□□□□□ -1.63
LDHB-209ENST00000542765 NOP58Q9Y2X3 529 aaKnown RBP4.87□□□□□ -1.63
LDHB-209ENST00000542765 ZDHHC9Q9Y397 364 aa4.87□□□□□ -1.63
LDHB-209ENST00000542765 ZNF536O15090 1300 aa4.87□□□□□ -1.63
LDHB-209ENST00000542765 NPEPPSL1A6NEC2 478 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 CUTAO60888 179 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 ZNF888P0CJ79 500 aaPredicted RBP4.86□□□□□ -1.63
LDHB-209ENST00000542765 POU3F3P20264 500 aaPredicted RBP4.86□□□□□ -1.63
LDHB-209ENST00000542765 CD40P25942 277 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 ETV4P43268 484 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 ANAPC15P60006 121 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 ADCY1Q08828 1119 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 R3HDM1Q15032 1099 aaKnown RBP4.86□□□□□ -1.63
LDHB-209ENST00000542765 GPR158Q5T848 1215 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 GRAMD4Q6IC98 578 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 DDX42Q86XP3 938 aaKnown RBP eCLIP4.86□□□□□ -1.63
LDHB-209ENST00000542765 PHYKPLQ8IUZ5 450 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 ATL2Q8NHH9 583 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 SLC5A5Q92911 643 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 SCYL1Q96KG9 808 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 PUS7Q96PZ0 661 aaKnown RBP4.86□□□□□ -1.63
LDHB-209ENST00000542765 KRTAP17-1Q9BYP8 105 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 ZDHHC5Q9C0B5 715 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 TMX1Q9H3N1 280 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 SEMA4AQ9H3S1 761 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 POFUT1Q9H488 388 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 ST6GALNAC2Q9UJ37 374 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 CDC42EP3Q9UKI2 254 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 APOBEC2Q9Y235 224 aaKnown RBP4.86□□□□□ -1.63
LDHB-209ENST00000542765 PTPN22Q9Y2R2 807 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 TSC22D4Q9Y3Q8 395 aa4.86□□□□□ -1.63
LDHB-209ENST00000542765 A0A0G2JNJ9 132 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 ZEB2O60315 1214 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 PRPF6O94906 941 aaKnown RBP4.85□□□□□ -1.63
LDHB-209ENST00000542765 EYA4O95677 639 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 LSP1P33241 339 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 KCNQ1P51787 676 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 PUM1Q14671 1186 aaKnown RBP eCLIP4.85□□□□□ -1.632e-15■□□□□ 8.9
LDHB-209ENST00000542765 NOLC1Q14978 699 aaKnown RBP eCLIP4.85□□□□□ -1.639e-8■■■■■ 41.6
LDHB-209ENST00000542765 EIF4HQ15056 248 aaKnown RBP4.85□□□□□ -1.63
LDHB-209ENST00000542765 DDB1Q16531 1140 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 BROXQ5VW32 411 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 LHFPL2Q6ZUX7 228 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 RALYLQ86SE5 291 aaKnown RBP4.85□□□□□ -1.63
LDHB-209ENST00000542765 CIR1Q86X95 450 aaPredicted RBP4.85□□□□□ -1.63
LDHB-209ENST00000542765 IFNL2Q8IZJ0 200 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 BCL6BQ8N143 479 aaPredicted RBP4.85□□□□□ -1.63
LDHB-209ENST00000542765 ZNF610Q8N9Z0 462 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 ZNF496Q96IT1 587 aaPredicted RBP4.85□□□□□ -1.63
LDHB-209ENST00000542765 MYL10Q9BUA6 226 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 Q9UFV3 132 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 MSRAQ9UJ68 235 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 ATP8A1Q9Y2Q0 1164 aa4.85□□□□□ -1.63
LDHB-209ENST00000542765 ELL2O00472 640 aaPredicted RBP4.84□□□□□ -1.63
LDHB-209ENST00000542765 BRINP1O60477 761 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 APOL3O95236 402 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 HMGCRP04035 888 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 CDKN1CP49918 316 aaPredicted RBP4.84□□□□□ -1.63
LDHB-209ENST00000542765 STAT5BP51692 787 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 RRADP55042 308 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 MAP3K12Q12852 859 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 FAM50AQ14320 339 aaKnown RBP4.84□□□□□ -1.63
LDHB-209ENST00000542765 USP10Q14694 798 aaKnown RBP4.84□□□□□ -1.63
LDHB-209ENST00000542765 STAT4Q14765 748 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 ZBTB41Q5SVQ8 909 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 UNQ6494/PRO21346Q6UXR6 183 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 LARP4Q71RC2 724 aaKnown RBP eCLIP4.84□□□□□ -1.638e-15■□□□□ 10.8
LDHB-209ENST00000542765 KANSL1Q7Z3B3 1105 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 HDGFL2Q7Z4V5 671 aaPredicted RBP4.84□□□□□ -1.63
LDHB-209ENST00000542765 ANKRD13AQ8IZ07 590 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 OR5AN1Q8NGI8 311 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 Q8TCH9 128 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 CARD11Q9BXL7 1154 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 KIAA1683Q9H0B3 1180 aa4.84□□□□□ -1.63
LDHB-209ENST00000542765 USP36Q9P275 1121 aaKnown RBP4.84□□□□□ -1.63
LDHB-209ENST00000542765 KDM1AO60341 852 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 ULK1O75385 1050 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 CDK11BP21127 795 aaKnown RBP4.83□□□□□ -1.64
LDHB-209ENST00000542765 TMPRSS15P98073 1019 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 ADCY2Q08462 1091 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 DUSP8Q13202 625 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 KIAA1841Q6NSI8 718 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 TIGD7Q6NT04 549 aaPredicted RBP4.83□□□□□ -1.64
LDHB-209ENST00000542765 TCTN3Q6NUS6 607 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 ESPNLQ6ZVH7 1005 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 PRPF38AQ8NAV1 312 aaKnown RBP4.83□□□□□ -1.64
LDHB-209ENST00000542765 CLRN3Q8NCR9 226 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 RPGRQ92834 1020 aaKnown RBP4.83□□□□□ -1.64
LDHB-209ENST00000542765 BRINP2Q9C0B6 783 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 HAPLN2Q9GZV7 340 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 KLC2Q9H0B6 622 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 MTG2Q9H4K7 406 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 KCMF1Q9P0J7 381 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 MAGEL2Q9UJ55 1249 aa4.83□□□□□ -1.64
LDHB-209ENST00000542765 TESMINQ9Y4I5 508 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms