RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 C16orf70Q9BSU1 422 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 TMEM117Q9H0C3 514 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 FAM49AQ9H0Q0 323 aaPredicted RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 ZBP1Q9H171 429 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 ADAMTS10Q9H324 1103 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 PRORYQ9H606 182 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 MAN1C1Q9NR34 630 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 SMC4Q9NTJ3 1288 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 DPP7Q9UHL4 492 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 DNMT3LQ9UJW3 386 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 ZNF215Q9UL58 517 aaPredicted RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 PRR12Q9ULL5 1215 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 PCDHB9Q9Y5E1 797 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 HEMK1Q9Y5R4 338 aaPredicted RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 ZFP37Q9Y6Q3 630 aaPredicted RBP3.85□□□□□ -1.79
CHD4-209ENST00000542717 CCDC171Q6TFL3 1326 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 ZMYM2Q9UBW7 1377 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 C2orf16Q68DN1 1984 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 PCNX2A6NKB5 2137 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 SPAG17Q6Q759 2223 aa3.85□□□□□ -1.79
CHD4-209ENST00000542717 COL6A6A6NMZ7 2263 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 CACNA1EQ15878 2313 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 LCTP09848 1927 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 KIAA1217Q5T5P2 1943 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 MYH15Q9Y2K3 1946 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 CDX4O14627 284 aaPredicted RBP3.84□□□□□ -1.79
CHD4-209ENST00000542717 RRP8O43159 456 aaKnown RBP3.84□□□□□ -1.79
CHD4-209ENST00000542717 HOXA2O43364 376 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 TTLL1O95922 423 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 LGALS2P05162 132 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 CTSAP10619 480 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 C6P13671 934 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 FSHRP23945 695 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 HOXC8P31273 242 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 GBP1P32455 592 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 CLCN4P51793 760 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 MRPS6P82932 125 aaKnown RBP3.84□□□□□ -1.79
CHD4-209ENST00000542717 MGAT3Q09327 533 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 G3BP1Q13283 466 aaKnown RBP eCLIP3.84□□□□□ -1.792e-6■■□□□ 11.4
CHD4-209ENST00000542717 SERINC3Q13530 473 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 LRRC32Q14392 662 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 WTAPQ15007 396 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 CCDC96Q2M329 555 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 TMEM266Q2M3C6 531 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 C12orf60Q5U649 245 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 MYSM1Q5VVJ2 828 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 ZNF574Q6ZN55 896 aaPredicted RBP3.84□□□□□ -1.79
CHD4-209ENST00000542717 LRRC55Q6ZSA7 311 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 SLC24A5Q71RS6 500 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 ZNF444Q8N0Y2 327 aaPredicted RBP3.84□□□□□ -1.79
CHD4-209ENST00000542717 CMTR1Q8N1G2 835 aaKnown RBP3.84□□□□□ -1.79
CHD4-209ENST00000542717 PNPLA1Q8N8W4 532 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 SPRYD3Q8NCJ5 442 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 RNF169Q8NCN4 708 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 GMCL1P1Q8NEA9 526 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 CMASQ8NFW8 434 aaPredicted RBP3.84□□□□□ -1.79
CHD4-209ENST00000542717 NSUN6Q8TEA1 469 aaKnown RBP3.84□□□□□ -1.79
CHD4-209ENST00000542717 LMBR1Q8WVP7 490 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 LIN37Q96GY3 246 aaPredicted RBP3.84□□□□□ -1.79
CHD4-209ENST00000542717 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.84□□□□□ -1.79
CHD4-209ENST00000542717 BRD9Q9H8M2 597 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 ARMT1Q9H993 441 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 C1orf112Q9NSG2 853 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 HDAC5Q9UQL6 1122 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 GINS2Q9Y248 185 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 TRPV2Q9Y5S1 764 aa3.84□□□□□ -1.79
CHD4-209ENST00000542717 KALRNO60229 2985 aa3.84□□□□□ -1.8
CHD4-209ENST00000542717 FNDC1Q4ZHG4 1894 aaPredicted RBP3.84□□□□□ -1.8
CHD4-209ENST00000542717 MYO5AQ9Y4I1 1855 aaKnown RBP3.84□□□□□ -1.8
CHD4-209ENST00000542717 KAT6AQ92794 2004 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 ASCC3Q8N3C0 2202 aaKnown RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 COL12A1Q99715 3063 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 BCLAF3A2AJT9 711 aaKnown RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 TRABD2BA6NFA1 517 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 PATE3B3GLJ2 98 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 K7ESF4 209 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 ERVH48-1M5A8F1 160 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 SRGAP3O43295 1099 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 PRKAB2O43741 272 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 ZC3H11AO75152 810 aaKnown RBP eCLIP3.83□□□□□ -1.8
CHD4-209ENST00000542717 EIF3JO75822 258 aaKnown RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 GLUD1P00367 558 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 ADH1AP07327 375 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 CNPP09543 421 aaKnown RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 SPATA31D3P0C874 917 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 MYCLP12524 364 aaPredicted RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 MYF5P13349 255 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 NDUFV2P19404 249 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 ADSSP30520 456 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 IL12RB1P42701 662 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 POLGP54098 1239 aaPredicted RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 AK2P54819 239 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 BCAR1P56945 870 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 CXADRP78310 365 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 FAM193AP78312 1265 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 IGBP1P78318 339 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 IRX4P78413 519 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 RNASELQ05823 741 aaKnown RBP3.83□□□□□ -1.8
CHD4-209ENST00000542717 LMAN2Q12907 356 aa3.83□□□□□ -1.8
CHD4-209ENST00000542717 PPFIA1Q13136 1202 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms