RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 UBA1P22314 1058 aaKnown RBP7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 CYP2C19P33261 490 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 QARSP47897 775 aaKnown RBP7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 ACTR2P61160 394 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 ACVR2BQ13705 512 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 LAMC2Q13753 1193 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 MCM6Q14566 821 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 ECM1Q16610 540 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 CCL14Q16627 93 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 NBPF20Q3BBV1 942 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 TMEM119Q4V9L6 283 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 NAALADL2Q58DX5 795 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 PRAMEF19Q5SWL8 479 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 CELF3Q5SZQ8 465 aaKnown RBP7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 MFSD14CQ5VZR4 134 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 IQSEC1Q6DN90 963 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 ISM2Q6H9L7 571 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 SWSAP1Q6NVH7 229 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 FBXO46Q6PJ61 603 aaPredicted RBP7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 LRSAM1Q6UWE0 723 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 ELOA2Q8IYF1 753 aaPredicted RBP7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 KCTD17Q8N5Z5 321 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 RDM1Q8NG50 284 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 PIGOQ8TEQ8 1089 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 LARP4BQ92615 738 aaKnown RBP7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 ATP6V0A1Q93050 837 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 LXNQ9BS40 222 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 BLZF1Q9H2G9 400 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 TSPY26PQ9H489 355 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 BCAS3Q9H6U6 928 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 ZSWIM4Q9H7M6 989 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 PDGFCQ9NRA1 345 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 FLRT1Q9NZU1 646 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 GABBR1Q9UBS5 961 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 SYNGAP1Q96PV0 1343 aa7.4□□□□□ -1.22
CLTCL1-206ENST00000540896 MYH7BA7E2Y1 1941 aa7.4□□□□□ -1.23
CLTCL1-206ENST00000540896 ZNF236Q9UL36 1845 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 EYA4O95677 639 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 RPN1P04843 607 aaKnown RBP7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 MYL1P05976 194 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 PLA2G4BP0C869 781 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 MUTP22033 750 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 CASP1P29466 404 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 GRK4P32298 578 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 ADCYAP1R1P41586 468 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 ZNF445P59923 1031 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 PSMC5P62195 406 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 PSMC6P62333 389 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 ASIC1P78348 528 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 TNFAIP2Q03169 654 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 TYRO3Q06418 890 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 CUL4BQ13620 913 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 STX1AQ16623 288 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 CCDC144BQ3MJ40 725 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 SLC9C1Q4G0N8 1177 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 HYIQ5T013 277 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 UTP14CQ5TAP6 766 aaKnown RBP7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 COL13A1Q5TAT6 717 aaPredicted RBP7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 FAM160B1Q5W0V3 765 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 OLFML2BQ68BL8 750 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 TAPT1Q6NXT6 567 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 METTL7BQ6UX53 244 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 B3GNT9Q6UX72 402 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 ABHD15Q6UXT9 468 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 RBM43Q6ZSC3 357 aaKnown RBP7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 OTUD6AQ7L8S5 288 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 DYMQ7RTS9 669 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 GPBP1Q86WP2 473 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 SH3TC2Q8TF17 1288 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 LRRN4Q8WUT4 740 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 SEPT1Q8WYJ6 367 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 TRIB2Q92519 343 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 GLG1Q92896 1179 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 SPATA33Q96N06 139 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 MCOLN1Q9GZU1 580 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 NAT10Q9H0A0 1025 aaKnown RBP7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 BHMT2Q9H2M3 363 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 KDM4CQ9H3R0 1056 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 AZI2Q9H6S1 392 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 ZNF302Q9NR11 478 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 KBTBD4Q9NVX7 518 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 RMND1Q9NWS8 449 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 PCDHA5Q9Y5H7 936 aa7.39□□□□□ -1.23
CLTCL1-206ENST00000540896 PLXNA1Q9UIW2 1896 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 RBBP6Q7Z6E9 1792 aaKnown RBP7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 RBM47A0AV96 593 aaKnown RBP7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 ARHGEF35A5YM69 484 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 GOLGA6L3A6NEY3 463 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 NKRFO15226 690 aaKnown RBP eCLIP7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 DYNC1LI2O43237 492 aaPredicted RBP7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 AP1G2O75843 785 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 FARP2O94887 1054 aaPredicted RBP7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 ARIH2O95376 493 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 IGHA2P01877 340 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 HMGCRP04035 888 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 SUPT20HL2P0C7V6 817 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 XRCC6P12956 609 aaKnown RBP eCLIP7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 IDEP14735 1019 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 CNGA1P29973 690 aa7.38□□□□□ -1.23
CLTCL1-206ENST00000540896 YWHABP31946 246 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms