RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 MCCP23508 829 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 MZF1P28698 734 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-214ENST00000540865 BMPR1AP36894 532 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 MAP2K3P46734 347 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 MRPL12P52815 198 aaKnown RBP5.43□□□□□ -1.54
SNHG1-214ENST00000540865 PDE4BQ07343 736 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 TBC1D8BQ0IIM8 1120 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 COASYQ13057 564 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 PLEKHG4Q58EX7 1191 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 HSP90AB4PQ58FF6 505 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 ZNF618Q5T7W0 954 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 RCSD1Q6JBY9 416 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 ZSCAN25Q6NSZ9 544 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 C7orf31Q8N865 590 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 SMRP1Q8NCR6 262 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 DBF4BQ8NFT6 615 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 DNERQ8NFT8 737 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 TET1Q8NFU7 2136 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 AFG1LQ8WV93 481 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 SEPT8Q92599 483 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 COPS5Q92905 334 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 PPP2R3CQ969Q6 453 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 MSLNLQ96KJ4 702 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 C11orf84Q9BUA3 381 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-214ENST00000540865 PHF7Q9BWX1 381 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-214ENST00000540865 PAG1Q9NWQ8 432 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 CCPG1Q9ULG6 757 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 ISY1Q9ULR0 285 aaKnown RBP5.43□□□□□ -1.54
SNHG1-214ENST00000540865 RWDD3Q9Y3V2 267 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-214ENST00000540865 DMXL1Q9Y485 3027 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 PARP14Q460N5 1801 aa5.43□□□□□ -1.54
SNHG1-214ENST00000540865 COL4A4P53420 1690 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-214ENST00000540865 PLIN4Q96Q06 1357 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 CHD6Q8TD26 2715 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 SCN10AQ9Y5Y9 1956 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 COL11A1P12107 1806 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-214ENST00000540865 GSG1L2A8MUP6 293 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 MINDY4BA8MYZ0 360 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 RSPH10B2B2RC85 870 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 PATL2C9JE40 543 aaKnown RBP5.42□□□□□ -1.54
SNHG1-214ENST00000540865 NFIBO00712 420 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 GRM6O15303 877 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 LINC01565O15544 149 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 GH1P01241 217 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 MMP3P08254 477 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 IFIT2P09913 472 aaKnown RBP5.42□□□□□ -1.54
SNHG1-214ENST00000540865 RSPH10BP0C881 870 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 ARAFP10398 606 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 COL8A1P27658 744 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 ICAM3P32942 547 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 CTNNB1P35222 781 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 NDUFV1P49821 464 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 RRP1P56182 461 aaKnown RBP5.42□□□□□ -1.54
SNHG1-214ENST00000540865 SNAP25P60880 206 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 ARHGAP1Q07960 439 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 DGKDQ16760 1214 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 PTPN21Q16825 1174 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 MCTP2Q6DN12 878 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 CCDC62Q6P9F0 684 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 FCHSD1Q86WN1 690 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 STK11IPQ8N1F8 1099 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 CLASRPQ8N2M8 674 aaKnown RBP5.42□□□□□ -1.54
SNHG1-214ENST00000540865 FIBCD1Q8N539 461 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 TMEM57Q8N5G2 664 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 FRAT1Q92837 279 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-214ENST00000540865 NKD2Q969F2 451 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-214ENST00000540865 IL17RAQ96F46 866 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 RIPOR3Q96MK2 946 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 STRBPQ96SI9 672 aaKnown RBP5.42□□□□□ -1.54
SNHG1-214ENST00000540865 HAUS7Q99871 368 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 KATNAL1Q9BW62 490 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 PLVAPQ9BX97 442 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 IFIH1Q9BYX4 1025 aaKnown RBP5.42□□□□□ -1.54
SNHG1-214ENST00000540865 PUS7LQ9H0K6 701 aaKnown RBP5.42□□□□□ -1.54
SNHG1-214ENST00000540865 RANBP17Q9H2T7 1088 aaKnown RBP5.42□□□□□ -1.54
SNHG1-214ENST00000540865 IL1RAPL2Q9NP60 686 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 FAM13BQ9NYF5 915 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 CLEC1BQ9P126 229 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 TMEM63CQ9P1W3 806 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 HDAC6Q9UBN7 1215 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 PNMA2Q9UL42 364 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 BRPF3Q9ULD4 1205 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 TNNQ9UQP3 1299 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 EXOC6BQ9Y2D4 811 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 NAV1Q8NEY1 1877 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 MYO7AQ13402 2215 aa5.42□□□□□ -1.54
SNHG1-214ENST00000540865 SCN5AQ14524 2016 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 CFAP47Q6ZTR5 3102 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 KMT2BQ9UMN6 2715 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-214ENST00000540865 COL4A6Q14031 1691 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 FRYLO94915 3013 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.41□□□□□ -1.54
SNHG1-214ENST00000540865 PTPDC1A2A3K4 754 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 SHISA8B8ZZ34 492 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 HAS3O00219 553 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 OIP5O43482 229 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 MMP20O60882 483 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 CAND2O75155 1236 aa5.41□□□□□ -1.54
SNHG1-214ENST00000540865 PRDM1O75626 825 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms