RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 RESP18Q5W5W9 173 aa18.64■□□□□ 0.57
UBC-208ENST00000540700 BBXQ8WY36 941 aaPredicted RBP18.64■□□□□ 0.57
UBC-208ENST00000540700 GADD45BO75293 160 aaPredicted RBP18.63■□□□□ 0.57
UBC-208ENST00000540700 PLCG1P19174 1290 aa18.63■□□□□ 0.57
UBC-208ENST00000540700 UBA7P41226 1012 aa18.63■□□□□ 0.57
UBC-208ENST00000540700 MTERF2Q49AM1 385 aa18.63■□□□□ 0.57
UBC-208ENST00000540700 TPRNQ4KMQ1 711 aa18.63■□□□□ 0.57
UBC-208ENST00000540700 ADALQ6DHV7 355 aa18.63■□□□□ 0.57
UBC-208ENST00000540700 RUFY4Q6ZNE9 571 aa18.63■□□□□ 0.57
UBC-208ENST00000540700 CLEC17AQ6ZS10 378 aa18.63■□□□□ 0.57
UBC-208ENST00000540700 C7orf31Q8N865 590 aa18.63■□□□□ 0.57
UBC-208ENST00000540700 DHX38Q92620 1227 aaKnown RBP18.63■□□□□ 0.57
UBC-208ENST00000540700 SLC9A7Q96T83 725 aa18.63■□□□□ 0.57
UBC-208ENST00000540700 GOLPH3LQ9H4A5 285 aa18.63■□□□□ 0.57
UBC-208ENST00000540700 BLOC1S4Q9NUP1 217 aa18.63■□□□□ 0.57
UBC-208ENST00000540700 ARIH1Q9Y4X5 557 aaPredicted RBP18.63■□□□□ 0.57
UBC-208ENST00000540700 C17orf102A2RUQ5 167 aa18.62■□□□□ 0.57
UBC-208ENST00000540700 MBLAC1A4D2B0 266 aaPredicted RBP18.62■□□□□ 0.57
UBC-208ENST00000540700 C22orf31O95567 290 aa18.62■□□□□ 0.57
UBC-208ENST00000540700 MUTP22033 750 aa18.62■□□□□ 0.57
UBC-208ENST00000540700 RARRES1P49788 294 aa18.62■□□□□ 0.57
UBC-208ENST00000540700 PTPN11Q06124 597 aaPredicted RBP18.62■□□□□ 0.57
UBC-208ENST00000540700 SPRED2Q7Z698 418 aa18.62■□□□□ 0.57
UBC-208ENST00000540700 HERC6Q8IVU3 1022 aa18.62■□□□□ 0.57
UBC-208ENST00000540700 TMEM87AQ8NBN3 555 aa18.62■□□□□ 0.57
UBC-208ENST00000540700 FAM167AQ96KS9 214 aa18.62■□□□□ 0.57
UBC-208ENST00000540700 PANK2Q9BZ23 570 aa18.62■□□□□ 0.57
UBC-208ENST00000540700 C11orf16Q9NQ32 467 aa18.62■□□□□ 0.57
UBC-208ENST00000540700 CYP26B1Q9NR63 512 aa18.62■□□□□ 0.57
UBC-208ENST00000540700 NRCAMQ92823 1304 aa18.62■□□□□ 0.57
UBC-208ENST00000540700 KDM3AQ9Y4C1 1321 aa18.61■□□□□ 0.57
UBC-208ENST00000540700 DRP2Q13474 957 aa18.61■□□□□ 0.57
UBC-208ENST00000540700 E2F4Q16254 413 aa18.61■□□□□ 0.57
UBC-208ENST00000540700 ZNF484Q5JVG2 852 aa18.61■□□□□ 0.57
UBC-208ENST00000540700 MTHFD1LQ6UB35 978 aa18.61■□□□□ 0.57
UBC-208ENST00000540700 RETREG2Q8NC44 543 aa18.61■□□□□ 0.57
UBC-208ENST00000540700 NRBP2Q9NSY0 501 aa18.61■□□□□ 0.57
UBC-208ENST00000540700 BMP2KQ9NSY1 1161 aaPredicted RBP18.61■□□□□ 0.57
UBC-208ENST00000540700 ANKEF1Q9NU02 776 aa18.61■□□□□ 0.57
UBC-208ENST00000540700 HPSEQ9Y251 543 aa18.61■□□□□ 0.57
UBC-208ENST00000540700 STK24Q9Y6E0 443 aa18.61■□□□□ 0.57
UBC-208ENST00000540700 BRWD1Q9NSI6 2320 aa18.61■□□□□ 0.57
UBC-208ENST00000540700 MYH9P35579 1960 aaKnown RBP18.61■□□□□ 0.57
UBC-208ENST00000540700 ARID2Q68CP9 1835 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 COL1A2P08123 1366 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 FAM237AA0A1B0GTK4 181 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 A0A1B0GVL5 298 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 DKC1O60832 514 aaKnown RBP eCLIP18.6■□□□□ 0.57
UBC-208ENST00000540700 CMA1P23946 247 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 MKRN4PQ13434 485 aaPredicted RBP18.6■□□□□ 0.57
UBC-208ENST00000540700 PTGISQ16647 500 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 TRIM71Q2Q1W2 868 aaKnown RBP18.6■□□□□ 0.57
UBC-208ENST00000540700 XKR9Q5GH70 373 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 LINC01465Q8N7H1 131 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 PDILTQ8N807 584 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 PHOSPHO2Q8TCD6 241 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 CEP170P1Q96L14 293 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 NACC1Q96RE7 527 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 BHMT2Q9H2M3 363 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 XPNPEP1Q9NQW7 623 aa18.6■□□□□ 0.57
UBC-208ENST00000540700 DBR1Q9UK59 544 aaKnown RBP18.6■□□□□ 0.57
UBC-208ENST00000540700 IGKV6-21A0A0C4DH24 114 aa18.59■□□□□ 0.57
UBC-208ENST00000540700 A0A1W2PQ27 194 aa18.59■□□□□ 0.57
UBC-208ENST00000540700 A0A1W2PQ64 194 aa18.59■□□□□ 0.57
UBC-208ENST00000540700 A0A1W2PQD8 194 aa18.59■□□□□ 0.57
UBC-208ENST00000540700 SLC26A4O43511 780 aa18.59■□□□□ 0.57
UBC-208ENST00000540700 GPR37L1O60883 481 aa18.59■□□□□ 0.57
UBC-208ENST00000540700 PFKFB1P16118 471 aa18.59■□□□□ 0.57
UBC-208ENST00000540700 KLRC1P26715 233 aa18.59■□□□□ 0.57
UBC-208ENST00000540700 RFC2P35250 354 aa18.59■□□□□ 0.57
UBC-208ENST00000540700 SLC12A3P55017 1021 aa18.59■□□□□ 0.57
UBC-208ENST00000540700 RUSC1Q9BVN2 902 aa18.59■□□□□ 0.57
UBC-208ENST00000540700 TUBE1Q9UJT0 475 aa18.59■□□□□ 0.57
UBC-208ENST00000540700 RRN3P2A6NIE6 340 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 LPXNO60711 386 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 EYA4O95677 639 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 IQCF3P0C7M6 154 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 XRCC6P12956 609 aaKnown RBP eCLIP18.58■□□□□ 0.561e-13■□□□□ 10.4
UBC-208ENST00000540700 CLCN3P51790 818 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 NDUFA8P51970 172 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 MCM6Q14566 821 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 TMCO2Q7Z6W1 182 aaPredicted RBP18.58■□□□□ 0.56
UBC-208ENST00000540700 SERINC5Q86VE9 423 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 LRRC71Q8N4P6 559 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 FSIP1Q8NA03 581 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 GDPD5Q8WTR4 605 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 RAD54LQ92698 747 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 CALML4Q96GE6 196 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 CDK5RAP3Q96JB5 506 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 NT5C3AQ9H0P0 336 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 DHX33Q9H6R0 707 aaKnown RBP18.58■□□□□ 0.56
UBC-208ENST00000540700 CD320Q9NPF0 282 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 NOD1Q9Y239 953 aa18.58■□□□□ 0.56
UBC-208ENST00000540700 TRIP12Q14669 1992 aaPredicted RBP18.57■□□□□ 0.56
UBC-208ENST00000540700 LCHNA4D1U4 455 aa18.57■□□□□ 0.56
UBC-208ENST00000540700 POLR2DO15514 142 aaKnown RBP18.57■□□□□ 0.56
UBC-208ENST00000540700 MAFO75444 373 aaPredicted RBP18.57■□□□□ 0.56
UBC-208ENST00000540700 PLA2G4BP0C869 781 aa18.57■□□□□ 0.56
UBC-208ENST00000540700 KCNJ6P48051 423 aa18.57■□□□□ 0.56
UBC-208ENST00000540700 RRAGBQ5VZM2 374 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms