RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 LAG3P18627 525 aa3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 POU3F3P20264 500 aaPredicted RBP3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 ZEB1P37275 1124 aaPredicted RBP3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 PLA2G5P39877 138 aa3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 CXorf67Q86X51 503 aaPredicted RBP3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 CMTR2Q8IYT2 770 aaKnown RBP3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 IFNL3Q8IZI9 196 aa3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 GCDHQ92947 438 aaPredicted RBP3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 SLC7A6OSQ96CW6 309 aaPredicted RBP3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 ALG1Q9BT22 464 aa3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 WDR11Q9BZH6 1224 aa3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 SLC6A15Q9H2J7 730 aa3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 IL23AQ9NPF7 189 aa3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 SFMBT1Q9UHJ3 866 aa3.08□□□□□ -1.92
CBX3P4-201ENST00000538909 DNAJC9-AS1A6NH13 148 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 AGRPO00253 132 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 SMAD7O15105 426 aaKnown RBP3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 MFAP3LO75121 409 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 PPFIA4O75335 1185 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 C1RP00736 705 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 C4BPAP04003 597 aaKnown RBP3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 HK1P19367 917 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 ABCG1P45844 678 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 NTRK3Q16288 839 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 CCDC27Q2M243 656 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 LCORLQ8N3X6 602 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 NELL1Q92832 810 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 CAVIN3Q969G5 261 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 ARL8AQ96BM9 186 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 C16orf92Q96LL3 132 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 SERHL2Q9H4I8 314 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 CATSPERZQ9NTU4 200 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 ACTR10Q9NZ32 417 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 RCAN3Q9UKA8 241 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 WDR97A6NE52 1622 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 BIVM-ERCC5R4GMW8 1640 aa3.07□□□□□ -1.92
CBX3P4-201ENST00000538909 A0A1W2PQU0 124 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 PRAMEF22A3QJZ6 481 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 C2orf78A6NCI8 922 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 PRODHO43272 600 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 IPO13O94829 963 aaKnown RBP3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 AMY2AP04746 511 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 TYRP1P17643 537 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 AMY2BP19961 511 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 CXCR5P32302 372 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 PTTG1IPP53801 180 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 ADAM8P78325 824 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 TAP1Q03518 808 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 MAPK7Q13164 816 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 TCIRG1Q13488 830 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 URB2Q14146 1524 aaKnown RBP3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 GPR19Q15760 415 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 ERCC6LQ2NKX8 1250 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 PRR16Q569H4 304 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 FIGNQ5HY92 759 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 KLHDC10Q6PID8 442 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 HTR3DQ70Z44 454 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 OSTM1Q86WC4 334 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 BCL6BQ8N143 479 aaPredicted RBP3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 HIPK4Q8NE63 616 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 ZNF512Q96ME7 567 aaPredicted RBP3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 ZFYVE21Q9BQ24 234 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 LRFN3Q9BTN0 628 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 FANCD2Q9BXW9 1451 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 NCDNQ9UBB6 729 aa3.06□□□□□ -1.92
CBX3P4-201ENST00000538909 DNMBPQ6XZF7 1577 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 CUX1P39880 1505 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 CUX2O14529 1486 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 MRC2Q9UBG0 1479 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 PDS5BQ9NTI5 1447 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 H2AFYO75367 372 aaKnown RBP3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 RECQL4O94761 1208 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 GYPEP15421 78 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 KRTAP5-9P26371 169 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 ELLP55199 621 aaPredicted RBP3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 JAM2P57087 298 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 HERVK_113P62684 666 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 FAM189BP81408 668 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 SLC10A6Q3KNW5 377 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 KRT40Q6A162 431 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 MFSD5Q6N075 450 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 CCDC62Q6P9F0 684 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 GRASPQ7Z6J2 395 aaPredicted RBP3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 FAM98AQ8NCA5 519 aaKnown RBP3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 SIMC1Q8NDZ2 872 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 MDGA1Q8NFP4 955 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 WASF1Q92558 559 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 LPPQ93052 612 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 EIF2B4Q9UI10 523 aaKnown RBP3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 VWA7Q9Y334 891 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 MRVI1Q9Y6F6 885 aa3.05□□□□□ -1.92
CBX3P4-201ENST00000538909 TOP2BQ02880 1626 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 TARBP1Q13395 1621 aaKnown RBP3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 SYNJ1O43426 1573 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 TOPBP1Q92547 1522 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 CEP164Q9UPV0 1460 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 ASXL2Q76L83 1435 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 GNAT2P19087 354 aa3.04□□□□□ -1.92
CBX3P4-201ENST00000538909 AVPR1BP47901 424 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms