RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 FTOQ9C0B1 505 aaKnown RBP eCLIP10.62□□□□□ -0.71
COL4A6-208ENST00000538570 OSBPL3Q9H4L5 887 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 BATF3Q9NR55 127 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 NFKBIAP25963 317 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 KRT31Q15323 416 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 CDO1Q16878 200 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 EPM2AIP1Q7L775 607 aaPredicted RBP10.62□□□□□ -0.71
COL4A6-208ENST00000538570 PUS3Q9BZE2 481 aaKnown RBP10.62□□□□□ -0.71
COL4A6-208ENST00000538570 NDEL1Q9GZM8 345 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 MRGBPQ9NV56 204 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 TLR7Q9NYK1 1049 aaKnown RBP10.62□□□□□ -0.71
COL4A6-208ENST00000538570 LCMT1Q9UIC8 334 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 RASA4BC9J798 803 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 RASA4O43374 803 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 ATXN8OSP0DMR3 200 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 LTKP29376 864 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 NANOGNBQ7Z5D8 188 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 ZCCHC17Q9NP64 241 aaKnown RBP10.62□□□□□ -0.71
COL4A6-208ENST00000538570 SNX2O60749 519 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 CAV1Q03135 178 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 CUL4AQ13619 759 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 CAPRIN1Q14444 709 aaKnown RBP10.62□□□□□ -0.71
COL4A6-208ENST00000538570 SLFN12LQ6IEE8 588 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 RBM41Q96IZ5 413 aaKnown RBP10.62□□□□□ -0.71
COL4A6-208ENST00000538570 MSTO1Q9BUK6 570 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 SMYD3Q9H7B4 428 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 HACD3Q9P035 362 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 PALMO75781 387 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 KRT38O76015 456 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 CIITAP33076 1130 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 GGCXP38435 758 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 RAD23BP54727 409 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 NSUN2Q08J23 767 aaKnown RBP eCLIP10.62□□□□□ -0.713e-9■■■■■ 39.7
COL4A6-208ENST00000538570 Q3C1V9 767 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 C1orf146Q5VVC0 180 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 RGS9BPQ6ZS82 235 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 SCG3Q8WXD2 468 aaKnown RBP10.62□□□□□ -0.71
COL4A6-208ENST00000538570 YEATS2Q9ULM3 1422 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 ZFYVE16Q7Z3T8 1539 aa10.62□□□□□ -0.71
COL4A6-208ENST00000538570 KLHL38Q2WGJ6 581 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 FBXW10Q5XX13 1052 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 RWDD4Q6NW29 188 aaKnown RBP10.61□□□□□ -0.71
COL4A6-208ENST00000538570 OMA1Q96E52 524 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 USP21Q9UK80 565 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 PCDHB6Q9Y5E3 794 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 CLRN2A0PK11 232 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 GTPBP10A4D1E9 387 aaKnown RBP10.61□□□□□ -0.71
COL4A6-208ENST00000538570 ANP32DO95626 131 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 IFNAR1P17181 557 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 RESTQ13127 1097 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 MIF4GDA9UHW6 222 aaKnown RBP10.61□□□□□ -0.71
COL4A6-208ENST00000538570 CDC25AP30304 524 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 BEND6Q5SZJ8 279 aaPredicted RBP10.61□□□□□ -0.71
COL4A6-208ENST00000538570 ARL6IP4Q66PJ3 421 aaKnown RBP10.61□□□□□ -0.71
COL4A6-208ENST00000538570 TTC13Q8NBP0 860 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 ARHGEF5Q12774 1597 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 MLH3Q9UHC1 1453 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 GOLGA8IPA6NC78 632 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 GOLGA8JA6NMD2 632 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 STXBP3O00186 592 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 COPS2P61201 443 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.61□□□□□ -0.71
COL4A6-208ENST00000538570 GCNAQ96QF7 691 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 GTSE1Q9NYZ3 720 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 ADAMTS1Q9UHI8 967 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 CYP2C19P33261 490 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 UBE2SQ16763 222 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 PDXDC1Q6P996 788 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 UNC5CLQ8IV45 518 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 ECT2Q9H8V3 914 aa10.61□□□□□ -0.71
COL4A6-208ENST00000538570 PI4K2BG5E9Z4 385 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 DAB1O75553 588 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 GDF11O95390 407 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 LDHAP00338 332 aaKnown RBP10.6□□□□□ -0.71
COL4A6-208ENST00000538570 KRT8P05787 483 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 FOSL2P15408 326 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 AP2B1P63010 937 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 ZC3H12BQ5HYM0 836 aaKnown RBP10.6□□□□□ -0.71
COL4A6-208ENST00000538570 ARHGEF25Q86VW2 580 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 NEUROG2Q9H2A3 272 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 CEP72Q9P209 647 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 SNX24Q9Y343 169 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 ESRRBO95718 433 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 TBCCQ15814 346 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 DSTYKQ6XUX3 929 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 COG4Q9H9E3 785 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 CFAP73A6NFT4 308 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 USP33Q8TEY7 942 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 KIF17Q9P2E2 1029 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 KLHL8Q9P2G9 620 aaPredicted RBP10.6□□□□□ -0.71
COL4A6-208ENST00000538570 ZNF212Q9UDV6 495 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 ANAPC7Q9UJX3 599 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 HAUS5O94927 633 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 MORF4L2Q15014 288 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 IMPG1Q17R60 797 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 NLRP14Q86W24 1093 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 LRRC37BQ96QE4 947 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 NGRNQ9NPE2 291 aaKnown RBP10.6□□□□□ -0.71
COL4A6-208ENST00000538570 KITP10721 976 aa10.6□□□□□ -0.71
COL4A6-208ENST00000538570 LCORLQ8N3X6 602 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms