RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 FZD1Q9UP38 647 aa5.05□□□□□ -1.6
SNHG1-208ENST00000538266 PLAGL2Q9UPG8 496 aa5.05□□□□□ -1.6
SNHG1-208ENST00000538266 RBM8AQ9Y5S9 174 aaKnown RBP5.05□□□□□ -1.6
SNHG1-208ENST00000538266 U3KQE9 123 aa5.05□□□□□ -1.6
SNHG1-208ENST00000538266 DOCK1Q14185 1865 aa5.05□□□□□ -1.6
SNHG1-208ENST00000538266 SIPA1L1O43166 1804 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 OTOFQ9HC10 1997 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 TSPY2A6NKD2 308 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 PRR33A8MZF0 331 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 FAM155AB1AL88 458 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-208ENST00000538266 UBE2Q2LH0YL09 131 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 RBAK-RBAKDNI3L0D1 243 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 EPB41L2O43491 1005 aaKnown RBP5.04□□□□□ -1.6
SNHG1-208ENST00000538266 RANBP6O60518 1105 aaKnown RBP5.04□□□□□ -1.6
SNHG1-208ENST00000538266 USP2O75604 605 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-208ENST00000538266 PRDM1O75626 825 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 UBOX5O94941 541 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 SSBP05455 408 aaKnown RBP eCLIP5.04□□□□□ -1.6
SNHG1-208ENST00000538266 TSPY3P0CV98 308 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 TSPY8P0CW00 308 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 HSPA6P17066 643 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 ITIH2P19823 946 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 POLR2BP30876 1174 aaKnown RBP5.04□□□□□ -1.6
SNHG1-208ENST00000538266 SHMT1P34896 483 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 CCNFP41002 786 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 ECE1P42892 770 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 GIPRP48546 466 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 NT5C2P49902 561 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 GABPAQ06546 454 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 GRM1Q13255 1194 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 KRT32Q14532 448 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 RAB3GAP1Q15042 981 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 NKPD1Q17RQ9 610 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 ABCB5Q2M3G0 1257 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 NAALADL2Q58DX5 795 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 AKNAD1Q5T1N1 836 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 RUFY4Q6ZNE9 571 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 TMEM179Q6ZVK1 233 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 MOB2Q70IA6 237 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 SAPCD2Q86UD0 394 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 IQCA1Q86XH1 822 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 ERO1BQ86YB8 467 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 SCYL3Q8IZE3 742 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 ZNF444Q8N0Y2 327 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-208ENST00000538266 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.04□□□□□ -1.6
SNHG1-208ENST00000538266 STAG1Q8WVM7 1258 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 ESR2Q92731 530 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 ZKSCAN4Q969J2 545 aaPredicted RBP5.04□□□□□ -1.6
SNHG1-208ENST00000538266 COX4I2Q96KJ9 171 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 KREMEN1Q96MU8 473 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 SLC9A7Q96T83 725 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 FEZ1Q99689 392 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 TM9SF2Q99805 663 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.04□□□□□ -1.61e-17■■■□□ 16.6
SNHG1-208ENST00000538266 TINF2Q9BSI4 451 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 UBAC1Q9BSL1 405 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 KRT23Q9C075 422 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 LSG1Q9H089 658 aaKnown RBP5.04□□□□□ -1.6
SNHG1-208ENST00000538266 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.04□□□□□ -1.6
SNHG1-208ENST00000538266 DNAJC18Q9H819 358 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 AS3MTQ9HBK9 375 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 ZBTB21Q9ULJ3 1066 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 ATAD5Q96QE3 1844 aa5.04□□□□□ -1.6
SNHG1-208ENST00000538266 TMEM265A0A087WTH1 108 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 ERICH2A1L162 156 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 FAM86C2PA6NEL3 165 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 TNFRSF10CO14798 259 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 SLC27A2O14975 620 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 ORC4O43929 436 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 LRRN2O75325 713 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 GH2P01242 217 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 CEACAM5P06731 702 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 PSMA5P28066 241 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 KIR3DL1P43629 444 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 ICA1Q05084 483 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 BNIP3Q12983 259 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 SART3Q15020 963 aaKnown RBP5.03□□□□□ -1.6
SNHG1-208ENST00000538266 PPP2R5EQ16537 467 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 IFI16Q16666 785 aaKnown RBP5.03□□□□□ -1.6
SNHG1-208ENST00000538266 MSMPQ1L6U9 139 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 NOL9Q5SY16 702 aaKnown RBP5.03□□□□□ -1.6
SNHG1-208ENST00000538266 CDKAL1Q5VV42 579 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 CREB3L3Q68CJ9 461 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 RGMBQ6NW40 437 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 TATDN1Q6P1N9 297 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 DTX1Q86Y01 620 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 TBC1D10CQ8IV04 446 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 MFSD4AQ8N468 514 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 NCOA7Q8NI08 942 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 OPTNQ96CV9 577 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 ANAPC16Q96DE5 110 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 SHDQ96IW2 340 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 HHIPL1Q96JK4 782 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 CLMNQ96JQ2 1002 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 FBXL18Q96ME1 805 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 SH2D4AQ9H788 454 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 KANSL2Q9H9L4 492 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 ZNF112Q9UJU3 913 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 KCNH3Q9ULD8 1083 aa5.03□□□□□ -1.6
SNHG1-208ENST00000538266 STRIP2Q9ULQ0 834 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms