RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 FAM53CQ9NYF3 392 aa14.84□□□□□ -0.03
SMG6-203ENST00000536871 TRIM10Q9UDY6 481 aa14.84□□□□□ -0.03
SMG6-203ENST00000536871 FBXO40Q9UH90 709 aa14.84□□□□□ -0.03
SMG6-203ENST00000536871 PUF60Q9UHX1 559 aaKnown RBP14.84□□□□□ -0.03
SMG6-203ENST00000536871 INTUQ9ULD6 942 aa14.84□□□□□ -0.03
SMG6-203ENST00000536871 ASTN2O75129 1339 aaPredicted RBP14.83□□□□□ -0.03
SMG6-203ENST00000536871 MACROD2A1Z1Q3 448 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 RCCD1A6NED2 376 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 CLIC2O15247 247 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 ZRANB2O95218 330 aaKnown RBP eCLIP14.83□□□□□ -0.04
SMG6-203ENST00000536871 CBX1P83916 185 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 GTF2BQ00403 316 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 ENPEPQ07075 957 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 MSL3Q8N5Y2 521 aaKnown RBP14.83□□□□□ -0.04
SMG6-203ENST00000536871 DNERQ8NFT8 737 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 KIFAP3Q92845 792 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 CRACR2AQ9BSW2 395 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 GGA3Q9NZ52 723 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 GCNT4Q9P109 453 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 ZNF214Q9UL59 606 aaPredicted RBP14.83□□□□□ -0.04
SMG6-203ENST00000536871 SNX12Q9UMY4 172 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 HYOU1Q9Y4L1 999 aa14.83□□□□□ -0.04
SMG6-203ENST00000536871 TARSL2A2RTX5 802 aaKnown RBP14.82□□□□□ -0.04
SMG6-203ENST00000536871 TESPA1A2RU30 521 aaPredicted RBP14.82□□□□□ -0.04
SMG6-203ENST00000536871 PMM2O15305 246 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 TLR2O60603 784 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 EXOC3O60645 756 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 ATP1A1P05023 1023 aaKnown RBP14.82□□□□□ -0.04
SMG6-203ENST00000536871 PSAPP07602 524 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 STAT1P42224 750 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 FMO5P49326 533 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 HMGCS2P54868 508 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 RTP1P59025 263 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 ZC2HC1CQ53FD0 456 aaPredicted RBP14.82□□□□□ -0.04
SMG6-203ENST00000536871 ZNF572Q7Z3I7 529 aaPredicted RBP14.82□□□□□ -0.04
SMG6-203ENST00000536871 USP37Q86T82 979 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 DAW1Q8N136 415 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 ZKSCAN4Q969J2 545 aaPredicted RBP14.82□□□□□ -0.04
SMG6-203ENST00000536871 AFG3L2Q9Y4W6 797 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 ZBTB39O15060 712 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 ERCC3P19447 782 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 CASP4P49662 377 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 NCKAP1LP55160 1127 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 MCCD1P59942 119 aaPredicted RBP14.82□□□□□ -0.04
SMG6-203ENST00000536871 GFPT1Q06210 699 aaPredicted RBP14.82□□□□□ -0.04
SMG6-203ENST00000536871 BFSP1Q12934 665 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 NAB2Q15742 525 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 DPY19L2P1Q6NXN4 242 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 CC2D1AQ6P1N0 951 aaPredicted RBP14.82□□□□□ -0.04
SMG6-203ENST00000536871 WDR93Q6P2C0 686 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.82□□□□□ -0.04
SMG6-203ENST00000536871 SPIRE2Q8WWL2 714 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 CALR3Q96L12 384 aaKnown RBP14.82□□□□□ -0.04
SMG6-203ENST00000536871 STK33Q9BYT3 514 aa14.82□□□□□ -0.04
SMG6-203ENST00000536871 PFASO15067 1338 aa14.81□□□□□ -0.04
SMG6-203ENST00000536871 SLC9A1P19634 815 aa14.81□□□□□ -0.04
SMG6-203ENST00000536871 JAM2P57087 298 aa14.81□□□□□ -0.04
SMG6-203ENST00000536871 KCNA1Q09470 495 aa14.81□□□□□ -0.04
SMG6-203ENST00000536871 MAP9Q49MG5 647 aa14.81□□□□□ -0.04
SMG6-203ENST00000536871 IRF2BP2Q7Z5L9 587 aa14.81□□□□□ -0.04
SMG6-203ENST00000536871 FAM133AQ8N9E0 248 aa14.81□□□□□ -0.04
SMG6-203ENST00000536871 MCPH1Q8NEM0 835 aa14.81□□□□□ -0.04
SMG6-203ENST00000536871 CAGE1Q8TC20 777 aa14.81□□□□□ -0.04
SMG6-203ENST00000536871 PKD2L1Q9P0L9 805 aa14.81□□□□□ -0.04
SMG6-203ENST00000536871 XKR9Q5GH70 373 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 HAUS6Q7Z4H7 955 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 XXYLT1Q8NBI6 393 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 TRPM4Q8TD43 1214 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 LMBR1Q8WVP7 490 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 NTPCRQ9BSD7 190 aaKnown RBP14.8□□□□□ -0.04
SMG6-203ENST00000536871 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.8□□□□□ -0.04
SMG6-203ENST00000536871 CYP39A1Q9NYL5 469 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 SCAF8Q9UPN6 1271 aaKnown RBP14.8□□□□□ -0.04
SMG6-203ENST00000536871 SMCHD1A6NHR9 2005 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 PHIPQ8WWQ0 1821 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 DGAT1O75907 488 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 ICAM3P32942 547 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 COPB2P35606 906 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 PAFAH1B1P43034 410 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 GPS2Q13227 327 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 DMP1Q13316 513 aaPredicted RBP14.8□□□□□ -0.04
SMG6-203ENST00000536871 TMEM132BQ14DG7 1078 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 MIS18BP1Q6P0N0 1132 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 KCNN1Q92952 543 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 ZFP91Q96JP5 570 aaPredicted RBP14.8□□□□□ -0.04
SMG6-203ENST00000536871 TSPYL1Q9H0U9 437 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 JPH1Q9HDC5 661 aaPredicted RBP14.8□□□□□ -0.04
SMG6-203ENST00000536871 SIX2Q9NPC8 291 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 ADARB2Q9NS39 739 aaKnown RBP14.8□□□□□ -0.04
SMG6-203ENST00000536871 ZNF446Q9NWS9 450 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 PCDHGC5Q9Y5F6 944 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 CSADQ9Y600 493 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 FHOD1Q9Y613 1164 aa14.8□□□□□ -0.04
SMG6-203ENST00000536871 A0A0A6YYK5 440 aaPredicted RBP14.79□□□□□ -0.04
SMG6-203ENST00000536871 CES2O00748 559 aa14.79□□□□□ -0.04
SMG6-203ENST00000536871 ENC1O14682 589 aa14.79□□□□□ -0.04
SMG6-203ENST00000536871 PNMA6AP0CW24 399 aaPredicted RBP14.79□□□□□ -0.04
SMG6-203ENST00000536871 CYP2J2P51589 502 aa14.79□□□□□ -0.04
SMG6-203ENST00000536871 MYL7Q01449 175 aa14.79□□□□□ -0.04
SMG6-203ENST00000536871 KIAA0753Q2KHM9 967 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms