RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 RHPN2Q8IUC4 686 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 NPAS4Q8IUM7 802 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 TMEM192Q8IY95 271 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 C4orf32Q8N8J7 132 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 FBXO22Q8NEZ5 403 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 NLRP7Q8WX94 980 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 TMEM143Q96AN5 459 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 RGS18Q9NS28 235 aa15.97■□□□□ 0.15
UBE3B-206ENST00000536398 XIRP2A4UGR9 3374 aa15.96■□□□□ 0.15
UBE3B-206ENST00000536398 COL4A6Q14031 1691 aa15.96■□□□□ 0.15
UBE3B-206ENST00000536398 A0A087WZ62 844 aa15.96■□□□□ 0.15
UBE3B-206ENST00000536398 DENND3A2RUS2 1198 aa15.96■□□□□ 0.15
UBE3B-206ENST00000536398 C9IYK1 514 aa15.96■□□□□ 0.15
UBE3B-206ENST00000536398 GTPBP6O43824 516 aaPredicted RBP15.96■□□□□ 0.15
UBE3B-206ENST00000536398 DKC1O60832 514 aaKnown RBP eCLIP15.96■□□□□ 0.15
UBE3B-206ENST00000536398 DARSP14868 501 aaKnown RBP15.96■□□□□ 0.15
UBE3B-206ENST00000536398 TECP42680 631 aa15.96■□□□□ 0.15
UBE3B-206ENST00000536398 SARSP49591 514 aaKnown RBP15.96■□□□□ 0.15
UBE3B-206ENST00000536398 XKR9Q5GH70 373 aa15.96■□□□□ 0.15
UBE3B-206ENST00000536398 FIBCD1Q8N539 461 aa15.96■□□□□ 0.15
UBE3B-206ENST00000536398 SCLT1Q96NL6 688 aa15.96■□□□□ 0.15
UBE3B-206ENST00000536398 FDXACB1Q9BRP7 624 aaPredicted RBP15.96■□□□□ 0.15
UBE3B-206ENST00000536398 DHX33Q9H6R0 707 aaKnown RBP15.96■□□□□ 0.15
UBE3B-206ENST00000536398 PCDHB6Q9Y5E3 794 aa15.96■□□□□ 0.15
UBE3B-206ENST00000536398 ADGRA3Q8IWK6 1321 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 PRRC2BQ5JSZ5 2229 aaKnown RBP15.95■□□□□ 0.14
UBE3B-206ENST00000536398 MED24O75448 989 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 OR52Z1P0C646 297 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 SPATA31C1P0DKV0 1188 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 MCM2P49736 904 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 DNM2P50570 870 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 POLGP54098 1239 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-206ENST00000536398 FAM189BP81408 668 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 BTG3Q14201 252 aaPredicted RBP15.95■□□□□ 0.14
UBE3B-206ENST00000536398 FAM102BQ5T8I3 360 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 MCTP1Q6DN14 999 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 OTUD6AQ7L8S5 288 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 PIGOQ8TEQ8 1089 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 LRFN2Q9ULH4 789 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 PCDHB7Q9Y5E2 793 aa15.95■□□□□ 0.14
UBE3B-206ENST00000536398 MRPL42Q9Y6G3 142 aaKnown RBP15.95■□□□□ 0.14
UBE3B-206ENST00000536398 LYPLA2O95372 231 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 STAG3L1P0CL83 205 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 TRAPPC10P48553 1259 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 EMC2Q15006 297 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 ODR4Q5SWX8 454 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 SLC24A5Q71RS6 500 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 CATSPER3Q86XQ3 398 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 IL27Q8NEV9 243 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 PRPF31Q8WWY3 499 aaKnown RBP15.94■□□□□ 0.14
UBE3B-206ENST00000536398 SLC7A3Q8WY07 619 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 NLRP4Q96MN2 994 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 GCOM2Q9BZD3 368 aaPredicted RBP15.94■□□□□ 0.14
UBE3B-206ENST00000536398 XPNPEP1Q9NQW7 623 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 C1orf112Q9NSG2 853 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 NOL7Q9UMY1 257 aaKnown RBP15.94■□□□□ 0.14
UBE3B-206ENST00000536398 SMC3Q9UQE7 1217 aa15.94■□□□□ 0.14
UBE3B-206ENST00000536398 H3BNC9 293 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 SRGAP2CP0DJJ0 459 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 FGFR1P11362 822 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 CTNNB1P35222 781 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 BMPR1AP36894 532 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 RFC5P40937 340 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 GPM6BQ13491 265 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 ZNF710Q8N1W2 664 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 NEK9Q8TD19 979 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 CLP1Q92989 425 aaKnown RBP15.93■□□□□ 0.14
UBE3B-206ENST00000536398 JPH2Q9BR39 696 aaPredicted RBP15.93■□□□□ 0.14
UBE3B-206ENST00000536398 MINDY3Q9H8M7 445 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 IFT122Q9HBG6 1241 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 HCSTQ9UBK5 93 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 COL4A3BPQ9Y5P4 624 aa15.93■□□□□ 0.14
UBE3B-206ENST00000536398 COL4A4P53420 1690 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-206ENST00000536398 ZSCAN20P17040 1043 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-206ENST00000536398 LAMTOR4Q0VGL1 99 aa15.92■□□□□ 0.14
UBE3B-206ENST00000536398 PTGDRQ13258 359 aa15.92■□□□□ 0.14
UBE3B-206ENST00000536398 ORC2Q13416 577 aaPredicted RBP15.92■□□□□ 0.14
UBE3B-206ENST00000536398 SKIV2LQ15477 1246 aaKnown RBP15.92■□□□□ 0.14
UBE3B-206ENST00000536398 IL17AQ16552 155 aa15.92■□□□□ 0.14
UBE3B-206ENST00000536398 ECM1Q16610 540 aa15.92■□□□□ 0.14
UBE3B-206ENST00000536398 ZNF410Q86VK4 478 aa15.92■□□□□ 0.14
UBE3B-206ENST00000536398 CMTR2Q8IYT2 770 aaKnown RBP15.92■□□□□ 0.14
UBE3B-206ENST00000536398 SAMD11Q96NU1 681 aa15.92■□□□□ 0.14
UBE3B-206ENST00000536398 ANKEF1Q9NU02 776 aa15.92■□□□□ 0.14
UBE3B-206ENST00000536398 RNF19AQ9NV58 838 aa15.92■□□□□ 0.14
UBE3B-206ENST00000536398 KIF3AQ9Y496 699 aa15.92■□□□□ 0.14
UBE3B-206ENST00000536398 PPME1Q9Y570 386 aa15.92■□□□□ 0.14
UBE3B-206ENST00000536398 TBKBP1A7MCY6 615 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 H3BQV1 296 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 GRM6O15303 877 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 RARRES1P49788 294 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 CDC42EP1Q00587 391 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 CUL4AQ13619 759 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 POTEGQ6S5H5 508 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 FERMT3Q86UX7 667 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 ECHDC2Q86YB7 292 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 RNF169Q8NCN4 708 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 ASAP3Q8TDY4 903 aa15.91■□□□□ 0.14
UBE3B-206ENST00000536398 PSPC1Q8WXF1 523 aaKnown RBP15.91■□□□□ 0.14
UBE3B-206ENST00000536398 MTRQ99707 1265 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms