RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 PIK3AP1Q6ZUJ8 805 aa18.19■□□□□ 0.5
CLSTN3-204ENST00000535313 FAM178BQ8IXR5 827 aa18.19■□□□□ 0.5
CLSTN3-204ENST00000535313 POF1BQ8WVV4 589 aa18.19■□□□□ 0.5
CLSTN3-204ENST00000535313 ZNF668Q96K58 619 aaPredicted RBP18.19■□□□□ 0.5
CLSTN3-204ENST00000535313 IGFLR1Q9H665 355 aa18.19■□□□□ 0.5
CLSTN3-204ENST00000535313 HOXA2O43364 376 aa18.18■□□□□ 0.5
CLSTN3-204ENST00000535313 CCNT1O60563 726 aaKnown RBP18.18■□□□□ 0.5
CLSTN3-204ENST00000535313 CTDNEP1O95476 244 aa18.18■□□□□ 0.5
CLSTN3-204ENST00000535313 DARSP14868 501 aaKnown RBP18.18■□□□□ 0.5
CLSTN3-204ENST00000535313 CAMK1Q14012 370 aa18.18■□□□□ 0.5
CLSTN3-204ENST00000535313 CTC1Q2NKJ3 1217 aa18.18■□□□□ 0.5
CLSTN3-204ENST00000535313 GCOM2Q9BZD3 368 aaPredicted RBP18.18■□□□□ 0.5
CLSTN3-204ENST00000535313 BRMS1Q9HCU9 246 aa18.18■□□□□ 0.5
CLSTN3-204ENST00000535313 GJB4Q9NTQ9 266 aa18.18■□□□□ 0.5
CLSTN3-204ENST00000535313 TMEM150BA6NC51 233 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 DKC1O60832 514 aaKnown RBP eCLIP18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 STBD1O95210 358 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 FGFR1P11362 822 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 COL9A1P20849 921 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 DNAJB1P25685 340 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 SSTR3P32745 418 aaPredicted RBP18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 PPP2R5CQ13362 524 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 CSPP1Q1MSJ5 1256 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 ABI1Q8IZP0 508 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 GJD3Q8N144 294 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 NECAB1Q8N987 351 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 OXER1Q8TDS5 423 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 JPH2Q9BR39 696 aaPredicted RBP18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 SH2D3AQ9BRG2 576 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 TMEM117Q9H0C3 514 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 KCNMB3Q9NPA1 279 aa18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 TYW1Q9NV66 732 aaKnown RBP18.17■□□□□ 0.5
CLSTN3-204ENST00000535313 EML1O00423 815 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 TBX3O15119 743 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 DTNBO60941 627 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 LAG3P18627 525 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 KRT2P35908 639 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 LTBRP36941 435 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 QARSP47897 775 aaKnown RBP18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 UBE3AQ05086 875 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 DRP2Q13474 957 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 ECHDC2Q86YB7 292 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 THNSL1Q8IYQ7 743 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 MICAL1Q8TDZ2 1067 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 GTF3C6Q969F1 213 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 CEP89Q96ST8 783 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 EPHX3Q9H6B9 360 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 DACT1Q9NYF0 836 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 SUCLA2Q9P2R7 463 aaPredicted RBP18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 VAV3Q9UKW4 847 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 KIAA1671Q9BY89 1806 aa18.16■□□□□ 0.5
CLSTN3-204ENST00000535313 IGKV6-21A0A0C4DH24 114 aa18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 MAFO75444 373 aaPredicted RBP18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 BAG4O95429 457 aaKnown RBP18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 P4HBP07237 508 aaKnown RBP18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 FGFR4P22455 802 aa18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 GTF2F1P35269 517 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 IRS1P35568 1242 aa18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 NEK4P51957 841 aa18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 ME3Q16798 604 aa18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 ANO5Q75V66 913 aa18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 COLGALT1Q8NBJ5 622 aa18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 RNF169Q8NCN4 708 aa18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 INO80BQ9C086 356 aaPredicted RBP18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 CD320Q9NPF0 282 aa18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 FNDC1Q4ZHG4 1894 aaPredicted RBP18.15■□□□□ 0.5
CLSTN3-204ENST00000535313 ATG2AQ2TAZ0 1938 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 A0A0U1RQF3 1178 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 FGF18O76093 207 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 SFPQP23246 707 aaKnown RBP eCLIP18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 NDUFV1P49821 464 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 ADAM15Q13444 863 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 CLUL1Q15846 466 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 PLA2G4FQ68DD2 849 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 ZNF410Q86VK4 478 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 RHPN2Q8IUC4 686 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 EXOC8Q8IYI6 725 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 SLFN12Q8IYM2 578 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 LRRC43Q8N309 656 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 SLC7A3Q8WY07 619 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 HAS1Q92839 578 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 CASD1Q96PB1 797 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 CWH43Q9H720 699 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 CYP26B1Q9NR63 512 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 TLR9Q9NR96 1032 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 CHST12Q9NRB3 414 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 HCSTQ9UBK5 93 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 PRKAG3Q9UGI9 489 aa18.14■□□□□ 0.49
CLSTN3-204ENST00000535313 A0A087WZ62 844 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 CSDE1O75534 798 aaKnown RBP18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 LARGE1O95461 756 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 EOMESO95936 686 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 FDPSP14324 419 aaKnown RBP18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 NRIP1P48552 1158 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 DLX2Q07687 328 aaPredicted RBP18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 NR5A1Q13285 461 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 TRIM29Q14134 588 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 EPHA7Q15375 998 aa18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 EARS2Q5JPH6 523 aaKnown RBP18.13■□□□□ 0.49
CLSTN3-204ENST00000535313 ADGRD2Q7Z7M1 963 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms