RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 CLLU1OSQ5K130 101 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 PCNX4Q63HM2 1172 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 MTHFD1LQ6UB35 978 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 FAM228AQ86W67 206 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 KIAA0319LQ8IZA0 1049 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 ENAHQ8N8S7 591 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-206ENST00000535290 GIMAP8Q8ND71 665 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-206ENST00000535290 BORCS6Q96GS4 357 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 PIGSQ96S52 555 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 MYADMQ96S97 322 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 ZSCAN10Q96SZ4 725 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-206ENST00000535290 PPP1R16BQ96T49 567 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 FBXO4Q9UKT5 387 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 MTF2Q9Y483 593 aaPredicted RBP9.53□□□□□ -0.88
CLIP1-206ENST00000535290 IRAK3Q9Y616 596 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 DOCK5Q9H7D0 1870 aa9.53□□□□□ -0.88
CLIP1-206ENST00000535290 A0A0D9SFI3 127 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-206ENST00000535290 HOXA2O43364 376 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 LILRB5O75023 590 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 CTSAP10619 480 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 PCP11498 1178 aaKnown RBP9.52□□□□□ -0.89
CLIP1-206ENST00000535290 ITGB5P18084 799 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 PMLP29590 882 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 BCAR1P56945 870 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 STARD6P59095 220 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 SPEM2Q0P670 501 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 WTAPQ15007 396 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 FAM43BQ6ZT52 329 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-206ENST00000535290 ZNF589Q86UQ0 364 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-206ENST00000535290 NLRX1Q86UT6 975 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 IQCA1Q86XH1 822 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 ABI1Q8IZP0 508 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 NETO1Q8TDF5 533 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 BCL7CQ8WUZ0 217 aaPredicted RBP9.52□□□□□ -0.89
CLIP1-206ENST00000535290 NELL1Q92832 810 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 TMEM169Q96HH4 297 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 FAM227BQ96M60 508 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 HELLSQ9NRZ9 838 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 ZSCAN32Q9NX65 697 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 EPS15L1Q9UBC2 864 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 SETXQ7Z333 2677 aaKnown RBP9.52□□□□□ -0.89
CLIP1-206ENST00000535290 TTC41PQ6P2S7 1318 aa9.52□□□□□ -0.89
CLIP1-206ENST00000535290 B4E1Z4 1266 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 TBC1D4O60343 1298 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 KLRC1P26715 233 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 ALDH7A1P49419 539 aaKnown RBP9.51□□□□□ -0.89
CLIP1-206ENST00000535290 LPAL2Q16609 132 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 KIZQ2M2Z5 673 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 CCDC178Q5BJE1 867 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 USP17L6PQ6QN14 398 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 TSSK4Q6SA08 328 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 C15orf39Q6ZRI6 1047 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 PPFIBP1Q86W92 1011 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 ECHDC2Q86YB7 292 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 RNF169Q8NCN4 708 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 GPRASP2Q96D09 838 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 FAM212AQ96EL1 285 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 KLHL5Q96PQ7 755 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 OSMRQ99650 979 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 RPP25Q9BUL9 199 aaKnown RBP9.51□□□□□ -0.89
CLIP1-206ENST00000535290 VN1R3Q9BXE9 311 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 BCO2Q9BYV7 579 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 RNF41Q9H4P4 317 aaPredicted RBP9.51□□□□□ -0.89
CLIP1-206ENST00000535290 DCTPP1Q9H773 170 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 WDR6Q9NNW5 1121 aaKnown RBP9.51□□□□□ -0.89
CLIP1-206ENST00000535290 SLC2A4RGQ9NR83 387 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 MAD2L2Q9UI95 211 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 GMEB2Q9UKD1 530 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 ZMYM6O95789 1325 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 DENND4AQ7Z401 1863 aa9.51□□□□□ -0.89
CLIP1-206ENST00000535290 KANSL1LA0AUZ9 987 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 PALM3A6NDB9 673 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-206ENST00000535290 CYTH3O43739 400 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 PROS1P07225 676 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 CNPP09543 421 aaKnown RBP9.5□□□□□ -0.89
CLIP1-206ENST00000535290 MYBP10242 640 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 KLRC2P26717 231 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 CLCN4P51793 760 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 POLGP54098 1239 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-206ENST00000535290 GPC5P78333 572 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 SHC2P98077 582 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 SNW1Q13573 536 aaKnown RBP9.5□□□□□ -0.89
CLIP1-206ENST00000535290 GIT2Q14161 759 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 MCMDC2Q4G0Z9 681 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 ODR4Q5SWX8 454 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 N4BP2L1Q5TBK1 243 aaPredicted RBP9.5□□□□□ -0.89
CLIP1-206ENST00000535290 DDX53Q86TM3 631 aaKnown RBP9.5□□□□□ -0.89
CLIP1-206ENST00000535290 HELQQ8TDG4 1101 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 NXPE3Q969Y0 559 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 IGSF21Q96ID5 467 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 AZI2Q9H6S1 392 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 RIOX1Q9H6W3 641 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 ZSWIM5Q9P217 1185 aa9.5□□□□□ -0.89
CLIP1-206ENST00000535290 PNMA6FA0A0J9YX94 578 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 CCDC195A0A1B0GUA6 201 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 FAM170BA6NMN3 283 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 ANHXE9PGG2 379 aa9.49□□□□□ -0.89
CLIP1-206ENST00000535290 RIOK3O14730 519 aaKnown RBP9.49□□□□□ -0.89
CLIP1-206ENST00000535290 GDF9O60383 454 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms