RNA–Protein interactions for RNA: ENST00000533557.5

BBS1-222, Transcript of Bardet-Biedl syndrome 1, human

TSL 2

Gene BBS1, Length 1,043 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-222	ENST00000533557	HELQ	Q8TDG4	1101 aa		13.86	□□□□□ -0.19
BBS1-222	ENST00000533557	LY9	Q9HBG7	655 aa		13.86	□□□□□ -0.19
BBS1-222	ENST00000533557	DUSP12	Q9UNI6	340 aa		13.86	□□□□□ -0.19
BBS1-222	ENST00000533557	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.85	□□□□□ -0.19
BBS1-222	ENST00000533557	SMARCA1	P28370	1054 aa		13.85	□□□□□ -0.19
BBS1-222	ENST00000533557	CA8	P35219	290 aa		13.85	□□□□□ -0.19
BBS1-222	ENST00000533557	CLCN3	P51790	818 aa		13.85	□□□□□ -0.19
BBS1-222	ENST00000533557	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
BBS1-222	ENST00000533557	SWSAP1	Q6NVH7	229 aa		13.85	□□□□□ -0.19
BBS1-222	ENST00000533557	POTEG	Q6S5H5	508 aa		13.85	□□□□□ -0.19
BBS1-222	ENST00000533557	TRMT1L	Q7Z2T5	733 aa	Known RBP	13.85	□□□□□ -0.19
BBS1-222	ENST00000533557	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.85	□□□□□ -0.19
BBS1-222	ENST00000533557	LINC01465	Q8N7H1	131 aa		13.85	□□□□□ -0.19
BBS1-222	ENST00000533557	RTP3	Q9BQQ7	232 aa		13.85	□□□□□ -0.19
BBS1-222	ENST00000533557	DLGAP2	Q9P1A6	1054 aa		13.85	□□□□□ -0.19
BBS1-222	ENST00000533557	POTEM	A6NI47	508 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	MEIS3P2	A8K0S8	358 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	MEIS1	O00470	390 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	ADAMTS3	O15072	1205 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	CSDE1	O75534	798 aa	Known RBP	13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	IGHD	P01880	384 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	CFH	P08603	1231 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	NLRP11	P59045	1033 aa	Known RBP	13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	TRDN	Q13061	729 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	ZNF484	Q5JVG2	852 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	CHD1L	Q86WJ1	897 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	CCDC82	Q8N4S0	544 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	TNPO1	Q92973	898 aa	Known RBP	13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	MAP3K14	Q99558	947 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	SDF4	Q9BRK5	362 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	FBXL21	Q9UKT6	434 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	IRAK3	Q9Y616	596 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	CACNA1I	Q9P0X4	2223 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557	DENND4A	Q7Z401	1863 aa		13.84	□□□□□ -0.19
BBS1-222	ENST00000533557		A0A0U1RQF3	1178 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	ERICH2	A1L162	156 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	SPDYE3	A6NKU9	549 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	BACH1	O14867	736 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	DCN	P07585	359 aa	Known RBP	13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	CTSA	P10619	480 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	GLUL	P15104	373 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	SLC26A2	P50443	739 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	LONRF3	Q496Y0	759 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	CEP55	Q53EZ4	464 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	PDXDC2P	Q6P474	469 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	METTL13	Q8N6R0	699 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	SUMF1	Q8NBK3	374 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	ZNF302	Q9NR11	478 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	DZANK1	Q9NVP4	752 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	RNF216	Q9NWF9	866 aa	Predicted RBP	13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	SEC63	Q9UGP8	760 aa	Known RBP	13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	COL1A2	P08123	1366 aa		13.83	□□□□□ -0.2
BBS1-222	ENST00000533557	FAM86B1	E9PN63	330 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	HIP1	O00291	1037 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	HOXA2	O43364	376 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	LILRB3	O75022	631 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	LRRN2	O75325	713 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	DDAH1	O94760	285 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	FAM86B2	P0C5J1	330 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	SP9	P0CG40	484 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	NUCB1	Q02818	461 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	PTPN14	Q15678	1187 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	ODR4	Q5SWX8	454 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	OTOP3	Q7RTS5	596 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	DDX53	Q86TM3	631 aa	Known RBP	13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	CABP7	Q86V35	215 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	ABI1	Q8IZP0	508 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	SLC44A3	Q8N4M1	653 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	LRRC71	Q8N4P6	559 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	NCOA7	Q8NI08	942 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	CTCFL	Q8NI51	663 aa	Predicted RBP	13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	LPP	Q93052	612 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	IGSF21	Q96ID5	467 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	KLHL5	Q96PQ7	755 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	SEMA4A	Q9H3S1	761 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	NRDE2	Q9H7Z3	1164 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	WNT16	Q9UBV4	365 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	DNAJB4	Q9UDY4	337 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	CA14	Q9ULX7	337 aa		13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	MAP1B	P46821	2468 aa	Known RBP	13.82	□□□□□ -0.2
BBS1-222	ENST00000533557	GALT	P07902	379 aa		13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	CNP	P09543	421 aa	Known RBP	13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	MYB	P10242	640 aa		13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	EIF4B	P23588	611 aa	Known RBP	13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	ALDH7A1	P49419	539 aa	Known RBP	13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	CLCN4	P51793	760 aa		13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	SPECC1	Q5M775	1068 aa		13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	WWC2	Q6AWC2	1192 aa		13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	CCDC149	Q6ZUS6	474 aa		13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	ACSF2	Q96CM8	615 aa	Predicted RBP	13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	TMEM169	Q96HH4	297 aa		13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	MYADM	Q96S97	322 aa		13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	TBC1D17	Q9HA65	648 aa		13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.81	□□□□□ -0.2
BBS1-222	ENST00000533557		U3KPZ7	1027 aa	Predicted RBP	13.81	□□□□□ -0.2
BBS1-222	ENST00000533557	C2orf16	Q68DN1	1984 aa		13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms