RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 ZNF558Q96NG5 402 aa19.61■□□□□ 0.73
PKP3-208ENST00000531857 ZMYND12Q9H0C1 365 aa19.61■□□□□ 0.73
PKP3-208ENST00000531857 FAM86C1Q9NVL1 165 aa19.61■□□□□ 0.73
PKP3-208ENST00000531857 AKT3Q9Y243 479 aa19.61■□□□□ 0.73
PKP3-208ENST00000531857 PCDHA10Q9Y5I2 948 aa19.61■□□□□ 0.73
PKP3-208ENST00000531857 MAGEB2O15479 319 aa19.6■□□□□ 0.73
PKP3-208ENST00000531857 PDGFBP01127 241 aaPredicted RBP19.6■□□□□ 0.73
PKP3-208ENST00000531857 EIF4BP23588 611 aaKnown RBP19.6■□□□□ 0.73
PKP3-208ENST00000531857 AVPR2P30518 371 aa19.6■□□□□ 0.73
PKP3-208ENST00000531857 SETQ01105 290 aaPredicted RBP19.6■□□□□ 0.73
PKP3-208ENST00000531857 TSGA10IPQ3SY00 556 aa19.6■□□□□ 0.73
PKP3-208ENST00000531857 PRR16Q569H4 304 aa19.6■□□□□ 0.73
PKP3-208ENST00000531857 TMC7Q7Z402 723 aa19.6■□□□□ 0.73
PKP3-208ENST00000531857 SKAP1Q86WV1 359 aa19.6■□□□□ 0.73
PKP3-208ENST00000531857 LRRC43Q8N309 656 aa19.6■□□□□ 0.73
PKP3-208ENST00000531857 RNF169Q8NCN4 708 aa19.6■□□□□ 0.73
PKP3-208ENST00000531857 NGRNQ9NPE2 291 aaKnown RBP19.6■□□□□ 0.73
PKP3-208ENST00000531857 SPG21Q9NZD8 308 aa19.6■□□□□ 0.73
PKP3-208ENST00000531857 NAP1L2Q9ULW6 460 aaPredicted RBP19.6■□□□□ 0.73
PKP3-208ENST00000531857 CEP131Q9UPN4 1083 aa19.6■□□□□ 0.73
PKP3-208ENST00000531857 ESYT2A0FGR8 921 aa19.59■□□□□ 0.73
PKP3-208ENST00000531857 HOXA2O43364 376 aa19.59■□□□□ 0.73
PKP3-208ENST00000531857 ZNF862O60290 1169 aa19.59■□□□□ 0.73
PKP3-208ENST00000531857 CPA1P15085 419 aa19.59■□□□□ 0.73
PKP3-208ENST00000531857 ZSCAN20P17040 1043 aaPredicted RBP19.59■□□□□ 0.73
PKP3-208ENST00000531857 FGFR4P22455 802 aa19.59■□□□□ 0.73
PKP3-208ENST00000531857 KRT17Q04695 432 aa19.59■□□□□ 0.73
PKP3-208ENST00000531857 ABI1Q8IZP0 508 aa19.59■□□□□ 0.73
PKP3-208ENST00000531857 REXO1Q8N1G1 1221 aaKnown RBP19.59■□□□□ 0.73
PKP3-208ENST00000531857 LENG9Q96B70 501 aa19.59■□□□□ 0.73
PKP3-208ENST00000531857 MAP7D2Q96T17 732 aa19.59■□□□□ 0.73
PKP3-208ENST00000531857 SAMM50Q9Y512 469 aa19.59■□□□□ 0.73
PKP3-208ENST00000531857 C2orf71A6NGG8 1288 aa19.58■□□□□ 0.72
PKP3-208ENST00000531857 HOXB8P17481 243 aaPredicted RBP19.58■□□□□ 0.72
PKP3-208ENST00000531857 PPM1AP35813 382 aa19.58■□□□□ 0.72
PKP3-208ENST00000531857 GPC3P51654 580 aa19.58■□□□□ 0.72
PKP3-208ENST00000531857 ZBTB33Q86T24 672 aa19.58■□□□□ 0.72
PKP3-208ENST00000531857 SLC39A11Q8N1S5 342 aa19.58■□□□□ 0.72
PKP3-208ENST00000531857 MRPL43Q8N983 215 aaKnown RBP19.58■□□□□ 0.72
PKP3-208ENST00000531857 C6orf50Q9HD87 102 aa19.58■□□□□ 0.72
PKP3-208ENST00000531857 TCEAL9Q9UHQ7 104 aa19.58■□□□□ 0.72
PKP3-208ENST00000531857 HCFC2Q9Y5Z7 792 aa19.58■□□□□ 0.72
PKP3-208ENST00000531857 CACNA1HO95180 2353 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 EDIL3O43854 480 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 CSDE1O75534 798 aaKnown RBP19.57■□□□□ 0.72
PKP3-208ENST00000531857 OATP04181 439 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 DARSP14868 501 aaKnown RBP19.57■□□□□ 0.72
PKP3-208ENST00000531857 TMOD1P28289 359 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 CIITAP33076 1130 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 METAP2P50579 478 aaKnown RBP eCLIP19.57■□□□□ 0.729e-6■□□□□ 8.1
PKP3-208ENST00000531857 RCAN1P53805 252 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 UGCGQ16739 394 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 ZNF598Q86UK7 904 aaKnown RBP19.57■□□□□ 0.72
PKP3-208ENST00000531857 KREMEN2Q8NCW0 462 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 HELQQ8TDG4 1101 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 CASP10Q92851 521 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 FAM167AQ96KS9 214 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 RIPOR3Q96MK2 946 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 POMKQ9H5K3 350 aa19.57■□□□□ 0.72
PKP3-208ENST00000531857 DENND4AQ7Z401 1863 aa19.56■□□□□ 0.72
PKP3-208ENST00000531857 A0A0U1RQF3 1178 aa19.56■□□□□ 0.72
PKP3-208ENST00000531857 WDR64B1ANS9 1081 aa19.56■□□□□ 0.72
PKP3-208ENST00000531857 NT5C1B-RDH14C9J2C7 533 aa19.56■□□□□ 0.72
PKP3-208ENST00000531857 CLASP2O75122 1294 aaKnown RBP19.56■□□□□ 0.72
PKP3-208ENST00000531857 PRKCEQ02156 737 aa19.56■□□□□ 0.72
PKP3-208ENST00000531857 DRP2Q13474 957 aa19.56■□□□□ 0.72
PKP3-208ENST00000531857 SMC1AQ14683 1233 aaKnown RBP19.56■□□□□ 0.72
PKP3-208ENST00000531857 MCTP2Q6DN12 878 aa19.56■□□□□ 0.72
PKP3-208ENST00000531857 GJA10Q969M2 543 aa19.56■□□□□ 0.72
PKP3-208ENST00000531857 ADAM7Q9H2U9 754 aa19.56■□□□□ 0.72
PKP3-208ENST00000531857 SMOC2Q9H3U7 446 aa19.56■□□□□ 0.72
PKP3-208ENST00000531857 DISC1Q9NRI5 854 aa19.56■□□□□ 0.72
PKP3-208ENST00000531857 ZFHX2Q9C0A1 2572 aaPredicted RBP19.56■□□□□ 0.72
PKP3-208ENST00000531857 CFAP54Q96N23 3096 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 C2CD4DB7Z1M9 353 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 MSH4O15457 936 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 ST18O60284 1047 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 BRD1O95696 1058 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 WEE2P0C1S8 567 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 BCAR1P56945 870 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 TPRNQ4KMQ1 711 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 BMP2KLQ5H9B9 411 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 KANK3Q6NY19 840 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 PHKBQ93100 1093 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 SCLT1Q96NL6 688 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 NRBP2Q9NSY0 501 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 NR2E1Q9Y466 385 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 C2orf16Q68DN1 1984 aa19.55■□□□□ 0.72
PKP3-208ENST00000531857 CCDC196A0A1B0GTZ2 297 aa19.54■□□□□ 0.72
PKP3-208ENST00000531857 H0Y858 1186 aa19.54■□□□□ 0.72
PKP3-208ENST00000531857 PRPF3O43395 683 aaKnown RBP19.54■□□□□ 0.72
PKP3-208ENST00000531857 CHMP2AO43633 222 aa19.54■□□□□ 0.72
PKP3-208ENST00000531857 GFRA3O60609 400 aa19.54■□□□□ 0.72
PKP3-208ENST00000531857 EOMESO95936 686 aa19.54■□□□□ 0.72
PKP3-208ENST00000531857 GNA11P29992 359 aa19.54■□□□□ 0.72
PKP3-208ENST00000531857 CA8P35219 290 aa19.54■□□□□ 0.72
PKP3-208ENST00000531857 FGD1P98174 961 aa19.54■□□□□ 0.72
PKP3-208ENST00000531857 KRT32Q14532 448 aa19.54■□□□□ 0.72
PKP3-208ENST00000531857 CES5AQ6NT32 575 aa19.54■□□□□ 0.72
PKP3-208ENST00000531857 Q6ZUG5 572 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms