RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 ADCY8P40145 1251 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 AP3B2Q13367 1082 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 COG2Q14746 738 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 ZNF365Q70YC5 407 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 CCDC63Q8NA47 563 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 INPP4AQ96PE3 977 aaPredicted RBP12.25□□□□□ -0.45
NXF1-211ENST00000531709 THAP2Q9H0W7 228 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 CLRN2A0PK11 232 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 UBAP1LF5GYI3 381 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 POTEJP0CG39 1038 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 CTNNA2P26232 953 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 FLT3P36888 993 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 CRKP46108 304 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 CLNS1AP54105 237 aaKnown RBP12.25□□□□□ -0.45
NXF1-211ENST00000531709 PPP2R5EQ16537 467 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 TMEM132AQ24JP5 1023 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 FMNL3Q8IVF7 1028 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 CCDC13Q8IYE1 715 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 HVCN1Q96D96 273 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 THOC1Q96FV9 657 aaKnown RBP12.25□□□□□ -0.45
NXF1-211ENST00000531709 SH3GL2Q99962 352 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 INTS2Q9H0H0 1204 aaKnown RBP12.25□□□□□ -0.45
NXF1-211ENST00000531709 NKIRAS1Q9NYS0 192 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 FMO5P49326 533 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 SKOR1P84550 965 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 ZNF844Q08AG5 666 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 FAM102BQ5T8I3 360 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 RPUSD2Q8IZ73 545 aaKnown RBP12.25□□□□□ -0.45
NXF1-211ENST00000531709 RAPGEF5Q92565 580 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 CHMP6Q96FZ7 201 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 CCDC77Q9BR77 488 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 COA1Q9GZY4 146 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.25□□□□□ -0.45
NXF1-211ENST00000531709 ARHGEF10LQ9HCE6 1279 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 DBR1Q9UK59 544 aaKnown RBP12.25□□□□□ -0.45
NXF1-211ENST00000531709 ODF2LQ9ULJ1 636 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 DUOX1Q9NRD9 1551 aa12.25□□□□□ -0.45
NXF1-211ENST00000531709 CHUKO15111 745 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 PPP1R11O60927 126 aaPredicted RBP12.24□□□□□ -0.45
NXF1-211ENST00000531709 CHN1P15882 459 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 STX2P32856 288 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 SLC29A2Q14542 456 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 SYT2Q8N9I0 419 aaPredicted RBP12.24□□□□□ -0.45
NXF1-211ENST00000531709 FAM20AQ96MK3 541 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 NACC1Q96RE7 527 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 TDRD3Q9H7E2 651 aaKnown RBP12.24□□□□□ -0.45
NXF1-211ENST00000531709 HOMER3Q9NSC5 361 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 PPP1R9AQ9ULJ8 1098 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 TJP1Q07157 1748 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 ANKRD62A6NC57 917 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 DDX3XO00571 662 aaKnown RBP eCLIP12.24□□□□□ -0.452e-12■■■□□ 16.8
NXF1-211ENST00000531709 CAND2O75155 1236 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 HARSP12081 509 aaKnown RBP12.24□□□□□ -0.45
NXF1-211ENST00000531709 EIF3BP55884 814 aaKnown RBP12.24□□□□□ -0.45
NXF1-211ENST00000531709 SHROOM1Q2M3G4 852 aaPredicted RBP12.24□□□□□ -0.45
NXF1-211ENST00000531709 CCDC137Q6PK04 289 aaKnown RBP12.24□□□□□ -0.45
NXF1-211ENST00000531709 BCAS3Q9H6U6 928 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 ALG6Q9Y672 507 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 STK24Q9Y6E0 443 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 SPATA31A5Q5VU36 1347 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 SPATA31A7Q8IWB4 1347 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 PARP4Q9UKK3 1724 aaKnown RBP12.24□□□□□ -0.45
NXF1-211ENST00000531709 LAMB4A4D0S4 1761 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 THAP12O43422 761 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 SHOX2O60902 331 aaPredicted RBP12.24□□□□□ -0.45
NXF1-211ENST00000531709 HSPA9P38646 679 aaKnown RBP12.24□□□□□ -0.45
NXF1-211ENST00000531709 KAT2BQ92831 832 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 CNOT10Q9H9A5 744 aaKnown RBP12.24□□□□□ -0.45
NXF1-211ENST00000531709 PARP2Q9UGN5 583 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 EMSYQ7Z589 1322 aa12.24□□□□□ -0.45
NXF1-211ENST00000531709 MSH4O15457 936 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 HOXA7P31268 230 aaPredicted RBP12.23□□□□□ -0.45
NXF1-211ENST00000531709 TRAF1Q13077 416 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 SGO2Q562F6 1265 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 KIAA1755Q5JYT7 1200 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 NUGGCQ68CJ6 796 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 AADACL2Q6P093 401 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 FBXO25Q8TCJ0 367 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 C18orf8Q96DM3 657 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 PRMT1Q99873 361 aaKnown RBP12.23□□□□□ -0.45
NXF1-211ENST00000531709 ACTR5Q9H9F9 607 aaPredicted RBP12.23□□□□□ -0.45
NXF1-211ENST00000531709 PASKQ96RG2 1323 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 PITPNM2Q9BZ72 1349 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 LCA5LO95447 670 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 EYA4O95677 639 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 STAT2P52630 851 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 CYP4F22Q6NT55 531 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 LRIG3Q6UXM1 1119 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 IRF2BP2Q7Z5L9 587 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 ZFPM1Q8IX07 1006 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 TAB3Q8N5C8 712 aaPredicted RBP12.23□□□□□ -0.45
NXF1-211ENST00000531709 ACTRT1Q8TDG2 376 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 CALR3Q96L12 384 aaKnown RBP12.23□□□□□ -0.45
NXF1-211ENST00000531709 TEKT3Q9BXF9 490 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 STK33Q9BYT3 514 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 GANQ9H2C0 597 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 SUCLA2Q9P2R7 463 aaPredicted RBP12.23□□□□□ -0.45
NXF1-211ENST00000531709 CNTNAP4Q9C0A0 1308 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 FAM86B1E9PN63 330 aa12.23□□□□□ -0.45
NXF1-211ENST00000531709 FOXN3O00409 490 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms