RNA–Protein interactions for RNA: ENST00000531502.5

CTSB-221, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-221ENST00000531502 CACNA1HO95180 2353 aa16.3■□□□□ 0.2
CTSB-221ENST00000531502 NID2Q14112 1375 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 CPA1P15085 419 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 METAP2P50579 478 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■■■■■ 30
CTSB-221ENST00000531502 GPC3P51654 580 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 VCPP55072 806 aaKnown RBP16.29■□□□□ 0.2
CTSB-221ENST00000531502 PRR16Q569H4 304 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 LLGL2Q6P1M3 1020 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 SKAP1Q86WV1 359 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 SLC39A11Q8N1S5 342 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 LRRC43Q8N309 656 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 FAM167AQ96KS9 214 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 ZNF558Q96NG5 402 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 APOL5Q9BWW9 433 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 C6orf50Q9HD87 102 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 ENTPD7Q9NQZ7 604 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 CDH22Q9UJ99 828 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 AKT3Q9Y243 479 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 USP34Q70CQ2 3546 aa16.29■□□□□ 0.2
CTSB-221ENST00000531502 A0A0U1RQF3 1178 aa16.28■□□□□ 0.2
CTSB-221ENST00000531502 PRPF3O43395 683 aaKnown RBP16.28■□□□□ 0.2
CTSB-221ENST00000531502 OATP04181 439 aa16.28■□□□□ 0.2
CTSB-221ENST00000531502 SRGAP2BP0DMP2 458 aa16.28■□□□□ 0.2
CTSB-221ENST00000531502 HOXB8P17481 243 aaPredicted RBP16.28■□□□□ 0.2
CTSB-221ENST00000531502 PPM1AP35813 382 aa16.28■□□□□ 0.2
CTSB-221ENST00000531502 KRT32Q14532 448 aa16.28■□□□□ 0.2
CTSB-221ENST00000531502 ZNF710Q8N1W2 664 aa16.28■□□□□ 0.2
CTSB-221ENST00000531502 KCNB2Q92953 911 aa16.28■□□□□ 0.2
CTSB-221ENST00000531502 ZNF668Q96K58 619 aaPredicted RBP16.28■□□□□ 0.2
CTSB-221ENST00000531502 MAP7D2Q96T17 732 aa16.28■□□□□ 0.2
CTSB-221ENST00000531502 SPG21Q9NZD8 308 aa16.28■□□□□ 0.2
CTSB-221ENST00000531502 MYO10Q9HD67 2058 aa16.28■□□□□ 0.2
CTSB-221ENST00000531502 CCDC196A0A1B0GTZ2 297 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 WDR64B1ANS9 1081 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 MSH4O15457 936 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 HMGB1P09429 215 aaKnown RBP16.27■□□□□ 0.2
CTSB-221ENST00000531502 DARSP14868 501 aaKnown RBP16.27■□□□□ 0.2
CTSB-221ENST00000531502 ZSCAN20P17040 1043 aaPredicted RBP16.27■□□□□ 0.2
CTSB-221ENST00000531502 TMOD1P28289 359 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 AVPR2P30518 371 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 PRKCEQ02156 737 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 KRT17Q04695 432 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 NTRK3Q16288 839 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 UGCGQ16739 394 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 TMC7Q7Z402 723 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 MRPL43Q8N983 215 aaKnown RBP16.27■□□□□ 0.2
CTSB-221ENST00000531502 CCDC12Q8WUD4 166 aaPredicted RBP16.27■□□□□ 0.2
CTSB-221ENST00000531502 CEP89Q96ST8 783 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 DISC1Q9NRI5 854 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 SAMM50Q9Y512 469 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 HCFC2Q9Y5Z7 792 aa16.27■□□□□ 0.2
CTSB-221ENST00000531502 C2orf71A6NGG8 1288 aa16.26■□□□□ 0.19
CTSB-221ENST00000531502 EOMESO95936 686 aa16.26■□□□□ 0.19
CTSB-221ENST00000531502 PDGFBP01127 241 aaPredicted RBP16.26■□□□□ 0.19
CTSB-221ENST00000531502 FGFR4P22455 802 aa16.26■□□□□ 0.19
CTSB-221ENST00000531502 GNA11P29992 359 aa16.26■□□□□ 0.19
CTSB-221ENST00000531502 DRP2Q13474 957 aa16.26■□□□□ 0.19
CTSB-221ENST00000531502 TARBP2Q15633 366 aaKnown RBP16.26■□□□□ 0.19
CTSB-221ENST00000531502 Q6ZUG5 572 aa16.26■□□□□ 0.19
CTSB-221ENST00000531502 ABI1Q8IZP0 508 aa16.26■□□□□ 0.19
CTSB-221ENST00000531502 HELQQ8TDG4 1101 aa16.26■□□□□ 0.19
CTSB-221ENST00000531502 CASP10Q92851 521 aa16.26■□□□□ 0.19
CTSB-221ENST00000531502 PHKBQ93100 1093 aa16.26■□□□□ 0.19
CTSB-221ENST00000531502 NRBP2Q9NSY0 501 aa16.26■□□□□ 0.19
CTSB-221ENST00000531502 NAP1L2Q9ULW6 460 aaPredicted RBP16.26■□□□□ 0.19
CTSB-221ENST00000531502 CLASP2O75122 1294 aaKnown RBP16.25■□□□□ 0.19
CTSB-221ENST00000531502 STBD1O95210 358 aa16.25■□□□□ 0.19
CTSB-221ENST00000531502 SP100P23497 879 aaPredicted RBP16.25■□□□□ 0.19
CTSB-221ENST00000531502 SMC1AQ14683 1233 aaKnown RBP16.25■□□□□ 0.19
CTSB-221ENST00000531502 FBXL16Q8N461 479 aa16.25■□□□□ 0.19
CTSB-221ENST00000531502 RNF169Q8NCN4 708 aa16.25■□□□□ 0.19
CTSB-221ENST00000531502 SLC5A5Q92911 643 aa16.25■□□□□ 0.19
CTSB-221ENST00000531502 BRF1Q92994 677 aa16.25■□□□□ 0.19
CTSB-221ENST00000531502 RIPOR3Q96MK2 946 aa16.25■□□□□ 0.19
CTSB-221ENST00000531502 RIT2Q99578 217 aa16.25■□□□□ 0.19
CTSB-221ENST00000531502 AGXT2Q9BYV1 514 aa16.25■□□□□ 0.19
CTSB-221ENST00000531502 ADAM7Q9H2U9 754 aa16.25■□□□□ 0.19
CTSB-221ENST00000531502 POMKQ9H5K3 350 aa16.25■□□□□ 0.19
CTSB-221ENST00000531502 TCEAL9Q9UHQ7 104 aa16.25■□□□□ 0.19
CTSB-221ENST00000531502 IGKV6-21A0A0C4DH24 114 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 C2CD4DB7Z1M9 353 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 NT5C1B-RDH14C9J2C7 533 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 CSDE1O75534 798 aaKnown RBP16.24■□□□□ 0.19
CTSB-221ENST00000531502 USP11P51784 963 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 BCAR1P56945 870 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 ITIH3Q06033 890 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 TPRNQ4KMQ1 711 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 B3GNT9Q6UX72 402 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 KREMEN2Q8NCW0 462 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 BICD2Q8TD16 824 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 GJA10Q969M2 543 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 CCDC136Q96JN2 1154 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 TRAIPQ9BWF2 469 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 UNC45AQ9H3U1 944 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 FAM86C1Q9NVL1 165 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 NR2E1Q9Y466 385 aa16.24■□□□□ 0.19
CTSB-221ENST00000531502 GAS7O60861 476 aa16.23■□□□□ 0.19
CTSB-221ENST00000531502 PSMD10O75832 226 aa16.23■□□□□ 0.19
CTSB-221ENST00000531502 SFNP31947 248 aa16.23■□□□□ 0.19
CTSB-221ENST00000531502 JAK3P52333 1124 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms