RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 USP18Q9UMW8 372 aa5.19□□□□□ -1.58
SVIP-203ENST00000529848 PCDHB6Q9Y5E3 794 aa5.19□□□□□ -1.58
SVIP-203ENST00000529848 PCDHGA9Q9Y5G4 932 aaKnown RBP5.19□□□□□ -1.58
SVIP-203ENST00000529848 PCDHGA8Q9Y5G5 932 aa5.19□□□□□ -1.58
SVIP-203ENST00000529848 PCDHGA7Q9Y5G6 932 aa5.19□□□□□ -1.58
SVIP-203ENST00000529848 PCDHGA6Q9Y5G7 932 aa5.19□□□□□ -1.58
SVIP-203ENST00000529848 PCDHGA3Q9Y5H0 932 aa5.19□□□□□ -1.58
SVIP-203ENST00000529848 PCDHGA2Q9Y5H1 932 aa5.19□□□□□ -1.58
SVIP-203ENST00000529848 IRAK3Q9Y616 596 aa5.19□□□□□ -1.58
SVIP-203ENST00000529848 PMF1-BGLAPU3KQ54 211 aa5.19□□□□□ -1.58
SVIP-203ENST00000529848 OPHN1O60890 802 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 U2AF1L5P0DN76 240 aaPredicted RBP5.18□□□□□ -1.58
SVIP-203ENST00000529848 AGXTP21549 392 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 XPAP23025 273 aaPredicted RBP5.18□□□□□ -1.58
SVIP-203ENST00000529848 MTNR1BP49286 362 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 CDK17Q00537 523 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 U2AF1Q01081 240 aaKnown RBP eCLIP5.18□□□□□ -1.58
SVIP-203ENST00000529848 CD83Q01151 205 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 TRIM25Q14258 630 aaKnown RBP5.18□□□□□ -1.58
SVIP-203ENST00000529848 ODF1Q14990 250 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 STILQ15468 1287 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 DGKDQ16760 1214 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 KANK2Q63ZY3 851 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 OTOP2Q7RTS6 562 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 KCNK18Q7Z418 384 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 LINC00482Q8N8I6 264 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 OR14C36Q8NHC7 312 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 JADE3Q92613 823 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 HSPBAP1Q96EW2 488 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 HIST1H2AHQ96KK5 128 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 SIGLEC10Q96LC7 697 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 C8orf48Q96LL4 319 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 NOX5Q96PH1 765 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 HIST1H2AJQ99878 128 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 PITHD1Q9GZP4 211 aaPredicted RBP5.18□□□□□ -1.58
SVIP-203ENST00000529848 DPP7Q9UHL4 492 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 PRSS50Q9UI38 385 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 ZBTB21Q9ULJ3 1066 aa5.18□□□□□ -1.58
SVIP-203ENST00000529848 PNMA8BQ9ULN7 279 aaPredicted RBP5.18□□□□□ -1.58
SVIP-203ENST00000529848 A0A0A6YYJ9 748 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 GOLGA6CA6NDK9 693 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 GOLGA6BA6NDN3 693 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 H0Y858 1186 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 NRP2O60462 931 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 CUTAO60888 179 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 MAFO75444 373 aaPredicted RBP5.17□□□□□ -1.58
SVIP-203ENST00000529848 CHGBP05060 677 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 GOLGA6DP0CG33 693 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 ATF3P18847 181 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 GPR15P49685 360 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 NRG3P56975 720 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 MLC1Q15049 377 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 MUM1Q2TAK8 710 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 FAM102BQ5T8I3 360 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 MBNL2Q5VZF2 373 aaKnown RBP5.17□□□□□ -1.58
SVIP-203ENST00000529848 GRAMD4Q6IC98 578 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 TRMT10BQ6PF06 316 aaKnown RBP5.17□□□□□ -1.58
SVIP-203ENST00000529848 SYDE1Q6ZW31 735 aaPredicted RBP5.17□□□□□ -1.58
SVIP-203ENST00000529848 BMP8AQ7Z5Y6 402 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 TCEAL8Q8IYN2 117 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 CMTR2Q8IYT2 770 aaKnown RBP5.17□□□□□ -1.58
SVIP-203ENST00000529848 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.17□□□□□ -1.58
SVIP-203ENST00000529848 OR5AN1Q8NGI8 311 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 GAB3Q8WWW8 586 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 ACE2Q9BYF1 805 aaPredicted RBP5.17□□□□□ -1.58
SVIP-203ENST00000529848 CSRNP2Q9H175 543 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 IFT122Q9HBG6 1241 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 ZNF277Q9NRM2 450 aaPredicted RBP5.17□□□□□ -1.58
SVIP-203ENST00000529848 GEMIN8Q9NWZ8 242 aaKnown RBP5.17□□□□□ -1.58
SVIP-203ENST00000529848 GOLGA6AQ9NYA3 693 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 FBXO10Q9UK96 956 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 TMPRSS11EQ9UL52 423 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 CDY2AQ9Y6F7 541 aa5.17□□□□□ -1.58
SVIP-203ENST00000529848 ETV2O00321 342 aaPredicted RBP5.16□□□□□ -1.58
SVIP-203ENST00000529848 PLA2G1BP04054 148 aaKnown RBP5.16□□□□□ -1.58
SVIP-203ENST00000529848 GLDCP23378 1020 aa5.16□□□□□ -1.58
SVIP-203ENST00000529848 CYP2C19P33261 490 aa5.16□□□□□ -1.58
SVIP-203ENST00000529848 ADCY8P40145 1251 aa5.16□□□□□ -1.58
SVIP-203ENST00000529848 CCT2P78371 535 aaKnown RBP5.16□□□□□ -1.58
SVIP-203ENST00000529848 HTRA3P83110 453 aa5.16□□□□□ -1.58
SVIP-203ENST00000529848 ANO4Q32M45 955 aa5.16□□□□□ -1.58
SVIP-203ENST00000529848 CCDC178Q5BJE1 867 aa5.16□□□□□ -1.58
SVIP-203ENST00000529848 NXNQ6DKJ4 435 aa5.16□□□□□ -1.58
SVIP-203ENST00000529848 CXorf57Q6NSI4 855 aaKnown RBP5.16□□□□□ -1.58
SVIP-203ENST00000529848 MIER2Q8N344 545 aa5.16□□□□□ -1.58
SVIP-203ENST00000529848 RELTQ969Z4 430 aa5.16□□□□□ -1.58
SVIP-203ENST00000529848 SLC2A13Q96QE2 648 aa5.16□□□□□ -1.58
SVIP-203ENST00000529848 NUP88Q99567 741 aaPredicted RBP5.16□□□□□ -1.58
SVIP-203ENST00000529848 PCGF6Q9BYE7 350 aa5.16□□□□□ -1.58
SVIP-203ENST00000529848 PRDM12Q9H4Q4 367 aa5.16□□□□□ -1.58
SVIP-203ENST00000529848 POLR3BQ9NW08 1133 aaPredicted RBP5.16□□□□□ -1.58
SVIP-203ENST00000529848 SAE1Q9UBE0 346 aaPredicted RBP5.16□□□□□ -1.58
SVIP-203ENST00000529848 A0A0G2JNJ9 132 aa5.15□□□□□ -1.59
SVIP-203ENST00000529848 TCAF2A6NFQ2 919 aa5.15□□□□□ -1.59
SVIP-203ENST00000529848 KIF3BO15066 747 aa5.15□□□□□ -1.59
SVIP-203ENST00000529848 NDUFS2O75306 463 aa5.15□□□□□ -1.59
SVIP-203ENST00000529848 C5AR1P21730 350 aa5.15□□□□□ -1.59
SVIP-203ENST00000529848 SLC16A1P53985 500 aa5.15□□□□□ -1.59
SVIP-203ENST00000529848 TCIRG1Q13488 830 aa5.15□□□□□ -1.59
SVIP-203ENST00000529848 RTP5Q14D33 572 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms