RNA–Protein interactions for RNA: ENST00000529725.1

SIPA1-205, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-205ENST00000529725 EPC2Q52LR7 807 aa17.94■□□□□ 0.46
SIPA1-205ENST00000529725 TTC38Q5R3I4 469 aa17.94■□□□□ 0.46
SIPA1-205ENST00000529725 TMEM192Q8IY95 271 aa17.94■□□□□ 0.46
SIPA1-205ENST00000529725 EXOC8Q8IYI6 725 aa17.94■□□□□ 0.46
SIPA1-205ENST00000529725 SLC7A3Q8WY07 619 aa17.94■□□□□ 0.46
SIPA1-205ENST00000529725 ZNF689Q96CS4 500 aaPredicted RBP17.94■□□□□ 0.46
SIPA1-205ENST00000529725 RC3H2Q9HBD1 1191 aaKnown RBP17.94■□□□□ 0.46
SIPA1-205ENST00000529725 C1orf112Q9NSG2 853 aa17.94■□□□□ 0.46
SIPA1-205ENST00000529725 LRFN2Q9ULH4 789 aa17.94■□□□□ 0.46
SIPA1-205ENST00000529725 NOL7Q9UMY1 257 aaKnown RBP17.94■□□□□ 0.46
SIPA1-205ENST00000529725 PPME1Q9Y570 386 aa17.94■□□□□ 0.46
SIPA1-205ENST00000529725 PCDHB7Q9Y5E2 793 aa17.94■□□□□ 0.46
SIPA1-205ENST00000529725 ADGRA3Q8IWK6 1321 aa17.94■□□□□ 0.46
SIPA1-205ENST00000529725 LOXHD1Q8IVV2 1947 aa17.94■□□□□ 0.46
SIPA1-205ENST00000529725 GJB2P29033 226 aa17.93■□□□□ 0.46
SIPA1-205ENST00000529725 TRAPPC10P48553 1259 aa17.93■□□□□ 0.46
SIPA1-205ENST00000529725 POLGP54098 1239 aaPredicted RBP17.93■□□□□ 0.46
SIPA1-205ENST00000529725 DSC3Q14574 896 aa17.93■□□□□ 0.46
SIPA1-205ENST00000529725 XKR9Q5GH70 373 aa17.93■□□□□ 0.46
SIPA1-205ENST00000529725 SLC24A5Q71RS6 500 aa17.93■□□□□ 0.46
SIPA1-205ENST00000529725 RHPN2Q8IUC4 686 aa17.93■□□□□ 0.46
SIPA1-205ENST00000529725 NEK9Q8TD19 979 aa17.93■□□□□ 0.46
SIPA1-205ENST00000529725 GCOM2Q9BZD3 368 aaPredicted RBP17.93■□□□□ 0.46
SIPA1-205ENST00000529725 DHX33Q9H6R0 707 aaKnown RBP17.93■□□□□ 0.46
SIPA1-205ENST00000529725 PRDM6Q9NQX0 595 aa17.93■□□□□ 0.46
SIPA1-205ENST00000529725 A0A087WZ62 844 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 POTEMA6NI47 508 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 C9IYK1 514 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 CSDE1O75534 798 aaKnown RBP17.92■□□□□ 0.46
SIPA1-205ENST00000529725 LYPLA2O95372 231 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 OR52Z1P0C646 297 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 FGFR4P22455 802 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 RFC5P40937 340 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 TECP42680 631 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 MCTP1Q6DN14 999 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 KSR1Q8IVT5 923 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 FDXACB1Q9BRP7 624 aaPredicted RBP17.92■□□□□ 0.46
SIPA1-205ENST00000529725 RNF216Q9NWF9 866 aaPredicted RBP17.92■□□□□ 0.46
SIPA1-205ENST00000529725 LMCD1Q9NZU5 365 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 SMC3Q9UQE7 1217 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 TTC3P53804 2025 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 COL4A6Q14031 1691 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 REV3LO60673 3130 aa17.92■□□□□ 0.46
SIPA1-205ENST00000529725 ZSCAN20P17040 1043 aaPredicted RBP17.91■□□□□ 0.46
SIPA1-205ENST00000529725 CTNNB1P35222 781 aa17.91■□□□□ 0.46
SIPA1-205ENST00000529725 TOB1P50616 345 aaPredicted RBP17.91■□□□□ 0.46
SIPA1-205ENST00000529725 FAM189BP81408 668 aa17.91■□□□□ 0.46
SIPA1-205ENST00000529725 NBR1Q14596 966 aa17.91■□□□□ 0.46
SIPA1-205ENST00000529725 PAN2Q504Q3 1202 aaKnown RBP17.91■□□□□ 0.46
SIPA1-205ENST00000529725 ZNF410Q86VK4 478 aa17.91■□□□□ 0.46
SIPA1-205ENST00000529725 CMTR2Q8IYT2 770 aaKnown RBP17.91■□□□□ 0.46
SIPA1-205ENST00000529725 PRPF31Q8WWY3 499 aaKnown RBP17.91■□□□□ 0.46
SIPA1-205ENST00000529725 TMEM143Q96AN5 459 aa17.91■□□□□ 0.46
SIPA1-205ENST00000529725 NLRP4Q96MN2 994 aa17.91■□□□□ 0.46
SIPA1-205ENST00000529725 BMP2KQ9NSY1 1161 aaPredicted RBP17.91■□□□□ 0.46
SIPA1-205ENST00000529725 ANKEF1Q9NU02 776 aa17.91■□□□□ 0.46
SIPA1-205ENST00000529725 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.91■□□□□ 0.46
SIPA1-205ENST00000529725 H3BNC9 293 aa17.9■□□□□ 0.46
SIPA1-205ENST00000529725 H3BQV1 296 aa17.9■□□□□ 0.46
SIPA1-205ENST00000529725 GAS2O43903 313 aaKnown RBP17.9■□□□□ 0.46
SIPA1-205ENST00000529725 BMPR1AP36894 532 aa17.9■□□□□ 0.46
SIPA1-205ENST00000529725 GATMP50440 423 aa17.9■□□□□ 0.46
SIPA1-205ENST00000529725 GPM6BQ13491 265 aa17.9■□□□□ 0.46
SIPA1-205ENST00000529725 EMC2Q15006 297 aa17.9■□□□□ 0.46
SIPA1-205ENST00000529725 SKIV2LQ15477 1246 aaKnown RBP17.9■□□□□ 0.46
SIPA1-205ENST00000529725 C4orf32Q8N8J7 132 aa17.9■□□□□ 0.46
SIPA1-205ENST00000529725 PIGOQ8TEQ8 1089 aa17.9■□□□□ 0.46
SIPA1-205ENST00000529725 TCP11Q8WWU5 503 aa17.9■□□□□ 0.46
SIPA1-205ENST00000529725 PSPC1Q8WXF1 523 aaKnown RBP17.9■□□□□ 0.46
SIPA1-205ENST00000529725 CLP1Q92989 425 aaKnown RBP17.9■□□□□ 0.46
SIPA1-205ENST00000529725 INO80BQ9C086 356 aaPredicted RBP17.9■□□□□ 0.46
SIPA1-205ENST00000529725 RWDD3Q9Y3V2 267 aa17.9■□□□□ 0.46
SIPA1-205ENST00000529725 COL4A3BPQ9Y5P4 624 aa17.9■□□□□ 0.46
SIPA1-205ENST00000529725 GTF3C3Q9Y5Q9 886 aa17.9■□□□□ 0.46
SIPA1-205ENST00000529725 A0A087WWV3 80 aa17.89■□□□□ 0.45
SIPA1-205ENST00000529725 RB1P06400 928 aa17.89■□□□□ 0.45
SIPA1-205ENST00000529725 LINC00271P0C7V0 271 aa17.89■□□□□ 0.45
SIPA1-205ENST00000529725 SRGAP2CP0DJJ0 459 aa17.89■□□□□ 0.45
SIPA1-205ENST00000529725 SPATA31C1P0DKV0 1188 aa17.89■□□□□ 0.45
SIPA1-205ENST00000529725 FAM102BQ5T8I3 360 aa17.89■□□□□ 0.45
SIPA1-205ENST00000529725 CATSPER3Q86XQ3 398 aa17.89■□□□□ 0.45
SIPA1-205ENST00000529725 CCDC43Q96MW1 224 aaKnown RBP17.89■□□□□ 0.45
SIPA1-205ENST00000529725 MTRQ99707 1265 aa17.89■□□□□ 0.45
SIPA1-205ENST00000529725 ELAC1Q9H777 363 aaKnown RBP17.89■□□□□ 0.45
SIPA1-205ENST00000529725 ATP6V0A4Q9HBG4 840 aa17.89■□□□□ 0.45
SIPA1-205ENST00000529725 TUFT1Q9NNX1 390 aa17.89■□□□□ 0.45
SIPA1-205ENST00000529725 TMEM161AQ9NX61 479 aa17.89■□□□□ 0.45
SIPA1-205ENST00000529725 PCDHB6Q9Y5E3 794 aa17.89■□□□□ 0.45
SIPA1-205ENST00000529725 MRPL42Q9Y6G3 142 aaKnown RBP17.89■□□□□ 0.45
SIPA1-205ENST00000529725 COL4A4P53420 1690 aaPredicted RBP17.88■□□□□ 0.45
SIPA1-205ENST00000529725 C5orf67F2Z3F1 127 aa17.88■□□□□ 0.45
SIPA1-205ENST00000529725 MED24O75448 989 aa17.88■□□□□ 0.45
SIPA1-205ENST00000529725 XRCC6P12956 609 aaKnown RBP eCLIP17.88■□□□□ 0.45
SIPA1-205ENST00000529725 SFPQP23246 707 aaKnown RBP eCLIP17.88■□□□□ 0.45
SIPA1-205ENST00000529725 LAMTOR4Q0VGL1 99 aa17.88■□□□□ 0.45
SIPA1-205ENST00000529725 PTGDRQ13258 359 aa17.88■□□□□ 0.45
SIPA1-205ENST00000529725 PTPROQ16827 1216 aa17.88■□□□□ 0.45
SIPA1-205ENST00000529725 ERMNQ8TAM6 284 aa17.88■□□□□ 0.45
SIPA1-205ENST00000529725 POLR3CQ9BUI4 534 aaPredicted RBP17.88■□□□□ 0.45
SIPA1-205ENST00000529725 IFT122Q9HBG6 1241 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms