RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 SSRP1Q08945 709 aaKnown RBP17.62■□□□□ 0.41
CTSB-215ENST00000528965 RNF135Q8IUD6 432 aa17.62■□□□□ 0.41
CTSB-215ENST00000528965 ZNF558Q96NG5 402 aa17.62■□□□□ 0.41
CTSB-215ENST00000528965 KCNH6Q9H252 994 aa17.62■□□□□ 0.41
CTSB-215ENST00000528965 ADAMTS10Q9H324 1103 aa17.62■□□□□ 0.41
CTSB-215ENST00000528965 NCOA5Q9HCD5 579 aaKnown RBP17.62■□□□□ 0.41
CTSB-215ENST00000528965 CLEC1BQ9P126 229 aa17.62■□□□□ 0.41
CTSB-215ENST00000528965 MUTYHQ9UIF7 546 aa17.62■□□□□ 0.41
CTSB-215ENST00000528965 PCDHA4Q9UN74 947 aa17.62■□□□□ 0.41
CTSB-215ENST00000528965 EVPLQ92817 2033 aa17.62■□□□□ 0.41
CTSB-215ENST00000528965 MUC6Q6W4X9 2439 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 FNDC1Q4ZHG4 1894 aaPredicted RBP17.61■□□□□ 0.41
CTSB-215ENST00000528965 ZNF862O60290 1169 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 DEXIO95424 95 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 CCT2P78371 535 aaKnown RBP17.61■□□□□ 0.41
CTSB-215ENST00000528965 KRT17Q04695 432 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 Q4G0T1 1027 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 RUFY3Q7L099 469 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 MIER3Q7Z3K6 550 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 TBCKQ8TEA7 893 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 NLRP7Q8WX94 980 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 RSPH1Q8WYR4 309 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 MRPS27Q92552 414 aaKnown RBP17.61■□□□□ 0.41
CTSB-215ENST00000528965 MFSD14AQ96MC6 490 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 MRPL9Q9BYD2 267 aaKnown RBP17.61■□□□□ 0.41
CTSB-215ENST00000528965 UNC45AQ9H3U1 944 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 CWH43Q9H720 699 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 ENTPD7Q9NQZ7 604 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 DACT1Q9NYF0 836 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 SEPT9Q9UHD8 586 aaPredicted RBP17.61■□□□□ 0.41
CTSB-215ENST00000528965 USP15Q9Y4E8 981 aaPredicted RBP17.61■□□□□ 0.41
CTSB-215ENST00000528965 PCDHGC5Q9Y5F6 944 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 CYP46A1Q9Y6A2 500 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 PLXNA4Q9HCM2 1894 aa17.61■□□□□ 0.41
CTSB-215ENST00000528965 CARNS1A5YM72 827 aa17.6■□□□□ 0.41
CTSB-215ENST00000528965 FSCN2O14926 492 aa17.6■□□□□ 0.41
CTSB-215ENST00000528965 GLP2RO95838 553 aa17.6■□□□□ 0.41
CTSB-215ENST00000528965 DARSP14868 501 aaKnown RBP17.6■□□□□ 0.41
CTSB-215ENST00000528965 DNM2P50570 870 aa17.6■□□□□ 0.41
CTSB-215ENST00000528965 GPC3P51654 580 aa17.6■□□□□ 0.41
CTSB-215ENST00000528965 PLCB3Q01970 1234 aa17.6■□□□□ 0.41
CTSB-215ENST00000528965 DUSP6Q16828 381 aa17.6■□□□□ 0.41
CTSB-215ENST00000528965 XKR3Q5GH77 459 aa17.6■□□□□ 0.41
CTSB-215ENST00000528965 GALNT17Q6IS24 598 aa17.6■□□□□ 0.41
CTSB-215ENST00000528965 ECHDC2Q86YB7 292 aa17.6■□□□□ 0.41
CTSB-215ENST00000528965 RNF169Q8NCN4 708 aa17.6■□□□□ 0.41
CTSB-215ENST00000528965 NGRNQ9NPE2 291 aaKnown RBP17.6■□□□□ 0.41
CTSB-215ENST00000528965 EOMESO95936 686 aa17.59■□□□□ 0.41
CTSB-215ENST00000528965 ATF7P17544 494 aaPredicted RBP17.59■□□□□ 0.41
CTSB-215ENST00000528965 SFPQP23246 707 aaKnown RBP eCLIP17.59■□□□□ 0.41
CTSB-215ENST00000528965 BMS1Q14692 1282 aaKnown RBP17.59■□□□□ 0.41
CTSB-215ENST00000528965 UGCGQ16739 394 aa17.59■□□□□ 0.41
CTSB-215ENST00000528965 PLPP4Q5VZY2 271 aa17.59■□□□□ 0.41
CTSB-215ENST00000528965 KCNT2Q6UVM3 1135 aa17.59■□□□□ 0.41
CTSB-215ENST00000528965 MOXD1Q6UVY6 613 aa17.59■□□□□ 0.41
CTSB-215ENST00000528965 BLIDQ8IZY5 108 aa17.59■□□□□ 0.41
CTSB-215ENST00000528965 DAGLBQ8NCG7 672 aa17.59■□□□□ 0.41
CTSB-215ENST00000528965 CASD1Q96PB1 797 aa17.59■□□□□ 0.41
CTSB-215ENST00000528965 TCF25Q9BQ70 676 aa17.59■□□□□ 0.41
CTSB-215ENST00000528965 JPH2Q9BR39 696 aaPredicted RBP17.59■□□□□ 0.41
CTSB-215ENST00000528965 PHF7Q9BWX1 381 aaPredicted RBP17.59■□□□□ 0.41
CTSB-215ENST00000528965 GCOM2Q9BZD3 368 aaPredicted RBP17.59■□□□□ 0.41
CTSB-215ENST00000528965 HCSTQ9UBK5 93 aa17.59■□□□□ 0.41
CTSB-215ENST00000528965 PIEZO1Q92508 2521 aa17.58■□□□□ 0.41
CTSB-215ENST00000528965 LOC730098B7Z3J9 87 aa17.58■□□□□ 0.4
CTSB-215ENST00000528965 PER2O15055 1255 aa17.58■□□□□ 0.4
CTSB-215ENST00000528965 PSMD10O75832 226 aa17.58■□□□□ 0.4
CTSB-215ENST00000528965 CDKL5O76039 1030 aa17.58■□□□□ 0.4
CTSB-215ENST00000528965 ERVFC1P60507 584 aa17.58■□□□□ 0.4
CTSB-215ENST00000528965 NONOQ15233 471 aaKnown RBP eCLIP17.58■□□□□ 0.43e-11■■■■□ 21
CTSB-215ENST00000528965 MTERF2Q49AM1 385 aa17.58■□□□□ 0.4
CTSB-215ENST00000528965 KRT25Q7Z3Z0 450 aa17.58■□□□□ 0.4
CTSB-215ENST00000528965 EDAQ92838 391 aa17.58■□□□□ 0.4
CTSB-215ENST00000528965 ZNF274Q96GC6 653 aaPredicted RBP17.58■□□□□ 0.4
CTSB-215ENST00000528965 INO80BQ9C086 356 aaPredicted RBP17.58■□□□□ 0.4
CTSB-215ENST00000528965 ZSWIM6Q9HCJ5 1215 aa17.58■□□□□ 0.4
CTSB-215ENST00000528965 CHST12Q9NRB3 414 aa17.58■□□□□ 0.4
CTSB-215ENST00000528965 SPG21Q9NZD8 308 aa17.58■□□□□ 0.4
CTSB-215ENST00000528965 CYP3A7-CYP3A51PA0A087WV96 503 aa17.57■□□□□ 0.4
CTSB-215ENST00000528965 A0A0U1RQF3 1178 aa17.57■□□□□ 0.4
CTSB-215ENST00000528965 TDP2O95551 362 aa17.57■□□□□ 0.4
CTSB-215ENST00000528965 SKIP12755 728 aa17.57■□□□□ 0.4
CTSB-215ENST00000528965 CYP3A7P24462 503 aa17.57■□□□□ 0.4
CTSB-215ENST00000528965 TOB2Q14106 344 aaPredicted RBP17.57■□□□□ 0.4
CTSB-215ENST00000528965 CBX2Q14781 532 aaPredicted RBP17.57■□□□□ 0.4
CTSB-215ENST00000528965 TARBP2Q15633 366 aaKnown RBP17.57■□□□□ 0.4
CTSB-215ENST00000528965 HFE2Q6ZVN8 426 aa17.57■□□□□ 0.4
CTSB-215ENST00000528965 ZNF410Q86VK4 478 aa17.57■□□□□ 0.4
CTSB-215ENST00000528965 ZNF668Q96K58 619 aaPredicted RBP17.57■□□□□ 0.4
CTSB-215ENST00000528965 NIFKQ9BYG3 293 aaKnown RBP17.57■□□□□ 0.4
CTSB-215ENST00000528965 RNF19AQ9NV58 838 aa17.57■□□□□ 0.4
CTSB-215ENST00000528965 DKC1O60832 514 aaKnown RBP eCLIP17.56■□□□□ 0.44e-14■■■■■ 34
CTSB-215ENST00000528965 HOXB8P17481 243 aaPredicted RBP17.56■□□□□ 0.4
CTSB-215ENST00000528965 XBP1P17861 261 aa17.56■□□□□ 0.4
CTSB-215ENST00000528965 SMC1AQ14683 1233 aaKnown RBP17.56■□□□□ 0.4
CTSB-215ENST00000528965 TMEM184AQ6ZMB5 413 aa17.56■□□□□ 0.4
CTSB-215ENST00000528965 TMC7Q7Z402 723 aa17.56■□□□□ 0.4
CTSB-215ENST00000528965 CASP10Q92851 521 aa17.56■□□□□ 0.4
CTSB-215ENST00000528965 TM6SF1Q9BZW5 370 aa17.56■□□□□ 0.4
CTSB-215ENST00000528965 DDX25Q9UHL0 483 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms