RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	NLRP7	Q8WX94	980 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	SAMD11	Q96NU1	681 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	DHX33	Q9H6R0	707 aa	Known RBP	13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	RGS18	Q9NS28	235 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	PPME1	Q9Y570	386 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	MICAL3	Q7RTP6	2002 aa		13.16	□□□□□ -0.3
PSMC3-205	ENST00000528362	CSDE1	O75534	798 aa	Known RBP	13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	OR52Z1	P0C646	297 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	STAG3L1	P0CL83	205 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	IBSP	P21815	317 aa	Predicted RBP	13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	FGFR4	P22455	802 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	RFC5	P40937	340 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	TRAPPC10	P48553	1259 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	GATM	P50440	423 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	DNM2	P50570	870 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	GNL2	Q13823	731 aa	Known RBP	13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	BTG3	Q14201	252 aa	Predicted RBP	13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	NBR1	Q14596	966 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	SLC24A5	Q71RS6	500 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	NEK9	Q8TD19	979 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	SLC7A3	Q8WY07	619 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	CLP1	Q92989	425 aa	Known RBP	13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	JPH2	Q9BR39	696 aa	Predicted RBP	13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	BACH2	Q9BYV9	841 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	C1orf112	Q9NSG2	853 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	BMP2K	Q9NSY1	1161 aa	Predicted RBP	13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	LMCD1	Q9NZU5	365 aa		13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362	MRPL42	Q9Y6G3	142 aa	Known RBP	13.15	□□□□□ -0.3
PSMC3-205	ENST00000528362		A0A087WZ62	844 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	C5orf67	F2Z3F1	127 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362		H3BNC9	293 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	SPATA31C1	P0DKV0	1188 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	GJB2	P29033	226 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	CTNNB1	P35222	781 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	TOB1	P50616	345 aa	Predicted RBP	13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	POLG	P54098	1239 aa	Predicted RBP	13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	FAM189B	P81408	668 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	CDC42EP1	Q00587	391 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	EMC2	Q15006	297 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	PAN2	Q504Q3	1202 aa	Known RBP	13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	XKR9	Q5GH70	373 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	OTUD6A	Q7L8S5	288 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	ZNF410	Q86VK4	478 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	RHPN2	Q8IUC4	686 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	KSR1	Q8IVT5	923 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	CMTR2	Q8IYT2	770 aa	Known RBP	13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	C4orf32	Q8N8J7	132 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	TMEM143	Q96AN5	459 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	THEG	Q9P2T0	379 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	LRFN2	Q9ULH4	789 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	NOL7	Q9UMY1	257 aa	Known RBP	13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	KIF3A	Q9Y496	699 aa		13.14	□□□□□ -0.31
PSMC3-205	ENST00000528362	KAT6A	Q92794	2004 aa		13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	BMPR1A	P36894	532 aa		13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	TEC	P42680	631 aa		13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	GPM6B	Q13491	265 aa		13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	EXOC8	Q8IYI6	725 aa		13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	PRPF31	Q8WWY3	499 aa	Known RBP	13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	PSPC1	Q8WXF1	523 aa	Known RBP	13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	NLRP4	Q96MN2	994 aa		13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	IFT122	Q9HBG6	1241 aa		13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	XPNPEP1	Q9NQW7	623 aa		13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	TMEM161A	Q9NX61	479 aa		13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	PCDHB7	Q9Y5E2	793 aa		13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	COL4A3BP	Q9Y5P4	624 aa		13.13	□□□□□ -0.31
PSMC3-205	ENST00000528362	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362		A0A087WWV3	80 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	GAS2	O43903	313 aa	Known RBP	13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	MED24	O75448	989 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	FGFR1	P11362	822 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	RARRES1	P49788	294 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	LAMTOR4	Q0VGL1	99 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	SKIV2L	Q15477	1246 aa	Known RBP	13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	FAM102B	Q5T8I3	360 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	CATSPER3	Q86XQ3	398 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	ECHDC2	Q86YB7	292 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	PIGO	Q8TEQ8	1089 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	MRPL38	Q96DV4	380 aa	Known RBP	13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	ELAC1	Q9H777	363 aa	Known RBP	13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	ANKEF1	Q9NU02	776 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	RNF19A	Q9NV58	838 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	SMC3	Q9UQE7	1217 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	RWDD3	Q9Y3V2	267 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	PCDHB6	Q9Y5E3	794 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362	MYO9B	Q13459	2157 aa		13.12	□□□□□ -0.31
PSMC3-205	ENST00000528362		A0A0U1RQF3	1178 aa		13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	TBKBP1	A7MCY6	615 aa		13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	RB1	P06400	928 aa		13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	ZSCAN20	P17040	1043 aa	Predicted RBP	13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	ATF7	P17544	494 aa	Predicted RBP	13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	SFPQ	P23246	707 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	CUL4A	Q13619	759 aa		13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	PTPRO	Q16827	1216 aa		13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	MCTP1	Q6DN14	999 aa		13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	ZNF598	Q86UK7	904 aa	Known RBP	13.11	□□□□□ -0.31
PSMC3-205	ENST00000528362	FERMT3	Q86UX7	667 aa		13.11	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms