RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 OTUD6AQ7L8S5 288 aa36.99■■■■□ 3.51
SSSCA1-205ENST00000527920 SLC7A3Q8WY07 619 aa36.99■■■■□ 3.51
SSSCA1-205ENST00000527920 DYDC2Q96IM9 177 aa36.99■■■■□ 3.51
SSSCA1-205ENST00000527920 SCLT1Q96NL6 688 aa36.99■■■■□ 3.51
SSSCA1-205ENST00000527920 HSD17B14Q9BPX1 270 aa36.99■■■■□ 3.51
SSSCA1-205ENST00000527920 LRFN2Q9ULH4 789 aa36.99■■■■□ 3.51
SSSCA1-205ENST00000527920 KIF3AQ9Y496 699 aa36.99■■■■□ 3.51
SSSCA1-205ENST00000527920 LYPLA2O95372 231 aa36.98■■■■□ 3.51
SSSCA1-205ENST00000527920 YWHABP31946 246 aaKnown RBP36.98■■■■□ 3.51
SSSCA1-205ENST00000527920 RFC5P40937 340 aa36.98■■■■□ 3.51
SSSCA1-205ENST00000527920 MCM2P49736 904 aa36.98■■■■□ 3.51
SSSCA1-205ENST00000527920 FAM189BP81408 668 aa36.98■■■■□ 3.51
SSSCA1-205ENST00000527920 PTPROQ16827 1216 aa36.98■■■■□ 3.51
SSSCA1-205ENST00000527920 ZNF410Q86VK4 478 aa36.98■■■■□ 3.51
SSSCA1-205ENST00000527920 NOSTRINQ8IVI9 506 aa36.98■■■■□ 3.51
SSSCA1-205ENST00000527920 NLRP7Q8WX94 980 aa36.98■■■■□ 3.51
SSSCA1-205ENST00000527920 CEP170P1Q96L14 293 aa36.98■■■■□ 3.51
SSSCA1-205ENST00000527920 DHX33Q9H6R0 707 aaKnown RBP36.98■■■■□ 3.51
SSSCA1-205ENST00000527920 PCDHB7Q9Y5E2 793 aa36.98■■■■□ 3.51
SSSCA1-205ENST00000527920 RALGAPA2Q2PPJ7 1873 aa36.97■■■■□ 3.51
SSSCA1-205ENST00000527920 SLITRK3O94933 977 aa36.97■■■■□ 3.51
SSSCA1-205ENST00000527920 BMPR1AP36894 532 aa36.97■■■■□ 3.51
SSSCA1-205ENST00000527920 TRAPPC10P48553 1259 aa36.97■■■■□ 3.51
SSSCA1-205ENST00000527920 NPEPPSP55786 919 aa36.97■■■■□ 3.51
SSSCA1-205ENST00000527920 TJAP1Q5JTD0 557 aa36.97■■■■□ 3.51
SSSCA1-205ENST00000527920 MRPL38Q96DV4 380 aaKnown RBP36.97■■■■□ 3.51
SSSCA1-205ENST00000527920 EIF2AK1Q9BQI3 630 aaKnown RBP36.97■■■■□ 3.51
SSSCA1-205ENST00000527920 C11orf84Q9BUA3 381 aaPredicted RBP36.97■■■■□ 3.51
SSSCA1-205ENST00000527920 GCOM2Q9BZD3 368 aaPredicted RBP36.97■■■■□ 3.51
SSSCA1-205ENST00000527920 ELAC1Q9H777 363 aaKnown RBP36.97■■■■□ 3.51
SSSCA1-205ENST00000527920 SUCLA2Q9P2R7 463 aaPredicted RBP36.97■■■■□ 3.51
SSSCA1-205ENST00000527920 GAS2O43903 313 aaKnown RBP36.96■■■■□ 3.51
SSSCA1-205ENST00000527920 MCM7P33993 719 aa36.96■■■■□ 3.51
SSSCA1-205ENST00000527920 CTNNB1P35222 781 aa36.96■■■■□ 3.51
SSSCA1-205ENST00000527920 TXKP42681 527 aa36.96■■■■□ 3.51
SSSCA1-205ENST00000527920 CYP4A11Q02928 519 aa36.96■■■■□ 3.51
SSSCA1-205ENST00000527920 PLVAPQ9BX97 442 aa36.96■■■■□ 3.51
SSSCA1-205ENST00000527920 TMEM161AQ9NX61 479 aa36.96■■■■□ 3.51
SSSCA1-205ENST00000527920 VCANP13611 3396 aa36.96■■■■□ 3.51
SSSCA1-205ENST00000527920 GPM6BQ13491 265 aa36.95■■■■□ 3.51
SSSCA1-205ENST00000527920 CTTNQ14247 550 aaKnown RBP36.95■■■■□ 3.51
SSSCA1-205ENST00000527920 TMX3Q96JJ7 454 aa36.95■■■■□ 3.51
SSSCA1-205ENST00000527920 COL25A1Q9BXS0 654 aaPredicted RBP36.95■■■■□ 3.51
SSSCA1-205ENST00000527920 TMEM60Q9H2L4 133 aa36.95■■■■□ 3.51
SSSCA1-205ENST00000527920 COG5Q9UP83 839 aa36.95■■■■□ 3.51
SSSCA1-205ENST00000527920 U2AF2P26368 475 aaKnown RBP eCLIP36.94■■■■□ 3.5
SSSCA1-205ENST00000527920 POLGP54098 1239 aaPredicted RBP36.94■■■■□ 3.5
SSSCA1-205ENST00000527920 MRPS5P82675 430 aaKnown RBP36.94■■■■□ 3.5
SSSCA1-205ENST00000527920 GNL2Q13823 731 aaKnown RBP36.94■■■■□ 3.5
SSSCA1-205ENST00000527920 SKIV2LQ15477 1246 aaKnown RBP36.94■■■■□ 3.5
SSSCA1-205ENST00000527920 TPH2Q8IWU9 490 aa36.94■■■■□ 3.5
SSSCA1-205ENST00000527920 SYMPKQ92797 1274 aaKnown RBP36.94■■■■□ 3.5
SSSCA1-205ENST00000527920 INO80BQ9C086 356 aaPredicted RBP36.94■■■■□ 3.5
SSSCA1-205ENST00000527920 ZSCAN20P17040 1043 aaPredicted RBP36.93■■■■□ 3.5
SSSCA1-205ENST00000527920 ATP2B1P20020 1258 aa36.93■■■■□ 3.5
SSSCA1-205ENST00000527920 ZNF579Q8NAF0 562 aaKnown RBP36.93■■■■□ 3.5
SSSCA1-205ENST00000527920 ZNF668Q96K58 619 aaPredicted RBP36.93■■■■□ 3.5
SSSCA1-205ENST00000527920 ASB2Q96Q27 587 aa36.93■■■■□ 3.5
SSSCA1-205ENST00000527920 MRPL42Q9Y6G3 142 aaKnown RBP36.93■■■■□ 3.5
SSSCA1-205ENST00000527920 NAALADL2Q58DX5 795 aa36.92■■■■□ 3.5
SSSCA1-205ENST00000527920 RHPN2Q8IUC4 686 aa36.92■■■■□ 3.5
SSSCA1-205ENST00000527920 LMAN2LQ9H0V9 348 aa36.92■■■■□ 3.5
SSSCA1-205ENST00000527920 ANKEF1Q9NU02 776 aa36.92■■■■□ 3.5
SSSCA1-205ENST00000527920 NLRC5Q86WI3 1866 aa36.92■■■■□ 3.5
SSSCA1-205ENST00000527920 TTC28Q96AY4 2481 aa36.92■■■■□ 3.5
SSSCA1-205ENST00000527920 AAK1Q2M2I8 961 aa36.91■■■■□ 3.5
SSSCA1-205ENST00000527920 TIGD5Q53EQ6 642 aa36.91■■■■□ 3.5
SSSCA1-205ENST00000527920 TTC38Q5R3I4 469 aa36.91■■■■□ 3.5
SSSCA1-205ENST00000527920 PSPC1Q8WXF1 523 aaKnown RBP36.91■■■■□ 3.5
SSSCA1-205ENST00000527920 P2RX5Q93086 422 aa36.91■■■■□ 3.5
SSSCA1-205ENST00000527920 ATP6V0A4Q9HBG4 840 aa36.91■■■■□ 3.5
SSSCA1-205ENST00000527920 CHST12Q9NRB3 414 aa36.91■■■■□ 3.5
SSSCA1-205ENST00000527920 NOL7Q9UMY1 257 aaKnown RBP36.91■■■■□ 3.5
SSSCA1-205ENST00000527920 A0A087WZ62 844 aa36.9■■■■□ 3.5
SSSCA1-205ENST00000527920 CD2BP2O95400 341 aaKnown RBP36.9■■■■□ 3.5
SSSCA1-205ENST00000527920 SFPQP23246 707 aaKnown RBP eCLIP36.9■■■■□ 3.5
SSSCA1-205ENST00000527920 XKR9Q5GH70 373 aa36.9■■■■□ 3.5
SSSCA1-205ENST00000527920 TCP11Q8WWU5 503 aa36.9■■■■□ 3.5
SSSCA1-205ENST00000527920 FDXACB1Q9BRP7 624 aaPredicted RBP36.9■■■■□ 3.5
SSSCA1-205ENST00000527920 DACT1Q9NYF0 836 aa36.9■■■■□ 3.5
SSSCA1-205ENST00000527920 COL4A3BPQ9Y5P4 624 aa36.9■■■■□ 3.5
SSSCA1-205ENST00000527920 REV3LO60673 3130 aa36.9■■■■□ 3.5
SSSCA1-205ENST00000527920 OR52Z1P0C646 297 aa36.89■■■■□ 3.5
SSSCA1-205ENST00000527920 EMC2Q15006 297 aa36.89■■■■□ 3.5
SSSCA1-205ENST00000527920 POTEMA6NI47 508 aa36.88■■■■□ 3.49
SSSCA1-205ENST00000527920 HOXA2O43364 376 aa36.88■■■■□ 3.49
SSSCA1-205ENST00000527920 XRCC6P12956 609 aaKnown RBP eCLIP36.88■■■■□ 3.49
SSSCA1-205ENST00000527920 ZNF174Q15697 407 aa36.88■■■■□ 3.49
SSSCA1-205ENST00000527920 PAN2Q504Q3 1202 aaKnown RBP36.88■■■■□ 3.49
SSSCA1-205ENST00000527920 HLA-CQ95604 372 aa36.88■■■■□ 3.49
SSSCA1-205ENST00000527920 NLRP4Q96MN2 994 aa36.88■■■■□ 3.49
SSSCA1-205ENST00000527920 TRAIPQ9BWF2 469 aa36.88■■■■□ 3.49
SSSCA1-205ENST00000527920 A0A0U1RQF3 1178 aa36.87■■■■□ 3.49
SSSCA1-205ENST00000527920 ZBTB39O15060 712 aa36.87■■■■□ 3.49
SSSCA1-205ENST00000527920 ASAP2O43150 1006 aa36.87■■■■□ 3.49
SSSCA1-205ENST00000527920 GATMP50440 423 aa36.87■■■■□ 3.49
SSSCA1-205ENST00000527920 IFT122Q9HBG6 1241 aa36.87■■■■□ 3.49
SSSCA1-205ENST00000527920 FGFR4P22455 802 aa36.86■■■■□ 3.49
SSSCA1-205ENST00000527920 FAM102BQ5T8I3 360 aa36.86■■■■□ 3.49
SSSCA1-205ENST00000527920 ECHDC2Q86YB7 292 aa36.86■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms