RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 DKC1O60832 514 aaKnown RBP eCLIP14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 BAIAP3O94812 1187 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 SLITRK3O94933 977 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 MYL1P05976 194 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 PSAPP07602 524 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 CCDC192P0DO97 292 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 FOSL2P15408 326 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 CYP4A11Q02928 519 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 PNOCQ13519 176 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 ECM1Q16610 540 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 MIS18BP1Q6P0N0 1132 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 MAFAQ8NHW3 353 aaPredicted RBP14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 LARP4BQ92615 738 aaKnown RBP14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 SMARCE1Q969G3 411 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 NACC1Q96RE7 527 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 SLC9A7Q96T83 725 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 PCYT2Q99447 389 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 OSBPL7Q9BZF2 842 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 PRDM12Q9H4Q4 367 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 SLC28A3Q9HAS3 691 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 KBTBD4Q9NVX7 518 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 RGL1Q9NZL6 768 aa14.11□□□□□ -0.15
SSSCA1-203ENST00000526877 CCNE2O96020 404 aa14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 QARSP47897 775 aaKnown RBP14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 ACTR2P61160 394 aa14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 WDR5P61964 334 aaKnown RBP14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 ADGRE1Q14246 886 aa14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 CTTNQ14247 550 aaKnown RBP14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 CNKSR3Q6P9H4 555 aa14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 POTEGQ6S5H5 508 aa14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 HERC6Q8IVU3 1022 aa14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 GRAMD1CQ8IYS0 662 aa14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 LMBR1Q8WVP7 490 aa14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 TSPY26PQ9H489 355 aa14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 ZSWIM4Q9H7M6 989 aa14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 BMP2KQ9NSY1 1161 aaPredicted RBP14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 BLOC1S4Q9NUP1 217 aa14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 ZNF215Q9UL58 517 aaPredicted RBP14.1□□□□□ -0.15
SSSCA1-203ENST00000526877 EYSQ5T1H1 3165 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 RSPH10B2B2RC85 870 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 E9PMD0 336 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 LGR5O75473 907 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 ARHGEF15O94989 841 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 SSBP05455 408 aaKnown RBP eCLIP14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 PLA2G4BP0C869 781 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 RSPH10BP0C881 870 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 THPOP40225 353 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 PSMC5P62195 406 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 DHX8Q14562 1220 aaKnown RBP14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 MCM6Q14566 821 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 BANK1Q8NDB2 785 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 STAMQ92783 540 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 CCDC47Q96A33 483 aaKnown RBP14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 LXNQ9BS40 222 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 PCDHA5Q9Y5H7 936 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 NRCAMQ92823 1304 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 PRUNE2Q8WUY3 3088 aa14.09□□□□□ -0.15
SSSCA1-203ENST00000526877 UNC80Q8N2C7 3258 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 ABHD14A-ACY1A0A1B0GW23 586 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 BACH1O14867 736 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 CAND2O75155 1236 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 ATG7O95352 703 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 LYPLA2O95372 231 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 EYA4O95677 639 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 CA3P07451 260 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 GNAT1P11488 350 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 XRCC6P12956 609 aaKnown RBP eCLIP14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 DEFB103AP81534 67 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 TYRO3Q06418 890 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 DPYDQ12882 1025 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 FAM26DQ5JW98 314 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 MARCH8Q5T0T0 291 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 ABHD15Q6UXT9 468 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 KCNK18Q7Z418 384 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 TMCO2Q7Z6W1 182 aaPredicted RBP14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 RPAINQ86UA6 219 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 C4orf19Q8IY42 314 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 DBF4BQ8NFT6 615 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 LRRC15Q8TF66 581 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 ERCC4Q92889 916 aaPredicted RBP14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 GSDMAQ96QA5 445 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 C7orf25Q9BPX7 421 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 BLZF1Q9H2G9 400 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 SMARCAD1Q9H4L7 1026 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 ANO10Q9NW15 660 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 RMND1Q9NWS8 449 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 ERAP1Q9NZ08 941 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 GABBR1Q9UBS5 961 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 TUBE1Q9UJT0 475 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 MICAL3Q7RTP6 2002 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 EMSYQ7Z589 1322 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 TRANK1O15050 2925 aa14.08□□□□□ -0.16
SSSCA1-203ENST00000526877 IGKV6D-21A0A0A0MT36 114 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 MBLAC1A4D2B0 266 aaPredicted RBP14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 SARSP49591 514 aaKnown RBP14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 NLRP12P59046 1061 aa14.07□□□□□ -0.16
SSSCA1-203ENST00000526877 TAP1Q03518 808 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms