RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 NUDCQ9Y266 331 aa6.39□□□□□ -1.39
C11orf54-203ENST00000526335 COL4A3BPQ9Y5P4 624 aa6.39□□□□□ -1.39
C11orf54-203ENST00000526335 TOP2BQ02880 1626 aa6.39□□□□□ -1.39
C11orf54-203ENST00000526335 ARHGAP35Q9NRY4 1499 aa6.38□□□□□ -1.39
C11orf54-203ENST00000526335 NUDT3O95989 172 aa6.38□□□□□ -1.39
C11orf54-203ENST00000526335 HMGCRP04035 888 aa6.38□□□□□ -1.39
C11orf54-203ENST00000526335 NFYCQ13952 458 aa6.38□□□□□ -1.39
C11orf54-203ENST00000526335 MTERF2Q49AM1 385 aa6.38□□□□□ -1.39
C11orf54-203ENST00000526335 HOMER1Q86YM7 354 aa6.38□□□□□ -1.39
C11orf54-203ENST00000526335 ZNF808Q8N4W9 903 aaPredicted RBP6.38□□□□□ -1.39
C11orf54-203ENST00000526335 SH3RF2Q8TEC5 729 aa6.38□□□□□ -1.39
C11orf54-203ENST00000526335 ZDHHC5Q9C0B5 715 aa6.38□□□□□ -1.39
C11orf54-203ENST00000526335 PFDN2Q9UHV9 154 aa6.38□□□□□ -1.39
C11orf54-203ENST00000526335 PUF60Q9UHX1 559 aaKnown RBP6.38□□□□□ -1.39
C11orf54-203ENST00000526335 BIVM-ERCC5R4GMW8 1640 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 LRRC9Q6ZRR7 1453 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 IFT140Q96RY7 1462 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 TRAV20A0A0B4J274 112 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.37□□□□□ -1.39
C11orf54-203ENST00000526335 TCRBV5S4A2TA0A5A2 114 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 MATN2O00339 956 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 PTPN1P18031 435 aaKnown RBP6.37□□□□□ -1.39
C11orf54-203ENST00000526335 ADRA1BP35368 520 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 KCNQ1P51787 676 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 GYS2P54840 703 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 DUSP8Q13202 625 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 Q6ZPA2 131 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 ZNF764Q96H86 408 aaPredicted RBP6.37□□□□□ -1.39
C11orf54-203ENST00000526335 KIAA1683Q9H0B3 1180 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 PRKRIP1Q9H875 184 aaPredicted RBP6.37□□□□□ -1.39
C11orf54-203ENST00000526335 PCDH12Q9NPG4 1184 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 SLC2A4RGQ9NR83 387 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 FBXO10Q9UK96 956 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 SRPK3Q9UPE1 567 aa6.37□□□□□ -1.39
C11orf54-203ENST00000526335 KDM2BQ8NHM5 1336 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 PLEKHD1A6NEE1 506 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 FAM90A27PA6NNH2 459 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 ADCY8P40145 1251 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 OS9Q13438 667 aaPredicted RBP6.36□□□□□ -1.39
C11orf54-203ENST00000526335 SQSTM1Q13501 440 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 TBR1Q16650 682 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 FAM43BQ6ZT52 329 aaPredicted RBP6.36□□□□□ -1.39
C11orf54-203ENST00000526335 EP400NLQ6ZTU2 488 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 SPATC1Q76KD6 591 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 FBXO41Q8TF61 875 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 BRINP2Q9C0B6 783 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 MSL2Q9HCI7 577 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 LAS1LQ9Y4W2 734 aaKnown RBP6.36□□□□□ -1.39
C11orf54-203ENST00000526335 URB2Q14146 1524 aaKnown RBP6.36□□□□□ -1.39
C11orf54-203ENST00000526335 ZNF608Q9ULD9 1512 aaPredicted RBP6.36□□□□□ -1.39
C11orf54-203ENST00000526335 ASXL2Q76L83 1435 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 UACAQ9BZF9 1416 aa6.36□□□□□ -1.39
C11orf54-203ENST00000526335 MARCH6O60337 910 aa6.35□□□□□ -1.39
C11orf54-203ENST00000526335 DIAPH1O60610 1272 aaKnown RBP6.35□□□□□ -1.39
C11orf54-203ENST00000526335 PTGS1P23219 599 aa6.35□□□□□ -1.39
C11orf54-203ENST00000526335 HIBADHP31937 336 aaKnown RBP6.35□□□□□ -1.39
C11orf54-203ENST00000526335 MSX2P35548 267 aaPredicted RBP6.35□□□□□ -1.39
C11orf54-203ENST00000526335 C21orf58P58505 322 aa6.35□□□□□ -1.39
C11orf54-203ENST00000526335 IL13RA1P78552 427 aa6.35□□□□□ -1.39
C11orf54-203ENST00000526335 GPR19Q15760 415 aa6.35□□□□□ -1.39
C11orf54-203ENST00000526335 LAIR1Q6GTX8 287 aa6.35□□□□□ -1.39
C11orf54-203ENST00000526335 ARHGAP36Q6ZRI8 547 aa6.35□□□□□ -1.39
C11orf54-203ENST00000526335 CXXC5Q7LFL8 322 aaKnown RBP6.35□□□□□ -1.39
C11orf54-203ENST00000526335 INCENPQ9NQS7 918 aa6.35□□□□□ -1.39
C11orf54-203ENST00000526335 TLR9Q9NR96 1032 aa6.35□□□□□ -1.39
C11orf54-203ENST00000526335 TMEM260Q9NX78 707 aa6.35□□□□□ -1.39
C11orf54-203ENST00000526335 ATP23Q9Y6H3 246 aa6.35□□□□□ -1.39
C11orf54-203ENST00000526335 RRP9O43818 475 aaKnown RBP6.34□□□□□ -1.39
C11orf54-203ENST00000526335 GJA4P35212 333 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 FAM193AP78312 1265 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 SSRP1Q08945 709 aaKnown RBP6.34□□□□□ -1.39
C11orf54-203ENST00000526335 FOXL1Q12952 345 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 PAK1Q13153 545 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 C2orf27AQ580R0 203 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 ZNF362Q5T0B9 420 aaPredicted RBP6.34□□□□□ -1.39
C11orf54-203ENST00000526335 C16orf86Q6ZW13 317 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 USP30Q70CQ3 517 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 LARP4Q71RC2 724 aaKnown RBP eCLIP6.34□□□□□ -1.39
C11orf54-203ENST00000526335 MTDHQ86UE4 582 aaKnown RBP6.34□□□□□ -1.39
C11orf54-203ENST00000526335 LRRC47Q8N1G4 583 aaKnown RBP6.34□□□□□ -1.39
C11orf54-203ENST00000526335 THAP3Q8WTV1 239 aaPredicted RBP6.34□□□□□ -1.39
C11orf54-203ENST00000526335 FRAT1Q92837 279 aaPredicted RBP6.34□□□□□ -1.39
C11orf54-203ENST00000526335 GALNT8Q9NY28 637 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 PLA2G3Q9NZ20 509 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 PRKAB1Q9Y478 270 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 TRAF6Q9Y4K3 522 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 KDM5BQ9UGL1 1544 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 NCOA1Q15788 1441 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 CFAP43Q8NDM7 1665 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 PHLDB1Q86UU1 1377 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 ABCA5Q8WWZ7 1642 aa6.34□□□□□ -1.39
C11orf54-203ENST00000526335 TMEM191CA6NGB0 347 aa6.33□□□□□ -1.4
C11orf54-203ENST00000526335 CLGNO14967 610 aa6.33□□□□□ -1.4
C11orf54-203ENST00000526335 HSPA5P11021 654 aaKnown RBP6.33□□□□□ -1.4
C11orf54-203ENST00000526335 HHEXQ03014 270 aa6.33□□□□□ -1.4
C11orf54-203ENST00000526335 TKFCQ3LXA3 575 aa6.33□□□□□ -1.4
C11orf54-203ENST00000526335 YOD1Q5VVQ6 348 aaPredicted RBP6.33□□□□□ -1.4
C11orf54-203ENST00000526335 OTOP2Q7RTS6 562 aa6.33□□□□□ -1.4
C11orf54-203ENST00000526335 KIAA0907Q7Z7F0 614 aaPredicted RBP6.33□□□□□ -1.4
C11orf54-203ENST00000526335 FAM9BQ8IZU0 186 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms