RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 USP2O75604 605 aaPredicted RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 SLITRK3O94933 977 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 P4HBP07237 508 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 MAPTP10636 758 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 CYP11B2P19099 503 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 MSX1P28360 303 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 CASP1P29466 404 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 SFNP31947 248 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 ABCD1P33897 745 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 NF2P35240 595 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 COPB2P35606 906 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 IREB2P48200 963 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 HIRAP54198 1017 aaPredicted RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 SNRPFP62306 86 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 ALCAMQ13740 583 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 MYBPC2Q14324 1141 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 PWP2Q15269 919 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 BMT2Q1RMZ1 405 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 FAM26FQ5R3K3 315 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 LRCH2Q5VUJ6 765 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 CCDC174Q6PII3 467 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 STXBP4Q6ZWJ1 553 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 VSIG10LQ86VR7 867 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 TMTC1Q8IUR5 882 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 ZC3H3Q8IXZ2 948 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 CCAR2Q8N163 923 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 SIX5Q8N196 739 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 CHST13Q8NET6 341 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 DNERQ8NFT8 737 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 C1orf216Q8TAB5 229 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 ZNF507Q8TCN5 953 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 SYTL5Q8TDW5 730 aaPredicted RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 GPRASP2Q96D09 838 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 ERGIC2Q96RQ1 377 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 IWS1Q96ST2 819 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 DUSP9Q99956 384 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 EIF2AK1Q9BQI3 630 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 ZNF577Q9BSK1 485 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 SYT17Q9BSW7 474 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 TEKT3Q9BXF9 490 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 SRRTQ9BXP5 876 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 RPAP3Q9H6T3 665 aaPredicted RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 VRTNQ9H8Y1 702 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 FBXO28Q9NVF7 368 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 SCHIP1Q9P0W5 487 aaPredicted RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 CGNQ9P2M7 1197 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 FBXO40Q9UH90 709 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 DBR1Q9UK59 544 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 PYCARDQ9ULZ3 195 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 TRAF3IP3Q9Y228 551 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 GDAQ9Y2T3 454 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 PCDHA2Q9Y5H9 948 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 ZHX2Q9Y6X8 837 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 UBE4BO95155 1302 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 B4DLN1 442 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 PDXKO00764 312 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 EIF3DO15371 548 aaKnown RBP eCLIP8.32□□□□□ -1.08
CTR9-202ENST00000524523 MED24O75448 989 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 GUCY2CP25092 1073 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 HOXA13P31271 388 aaPredicted RBP8.32□□□□□ -1.08
CTR9-202ENST00000524523 GTF2F1P35269 517 aaKnown RBP eCLIP8.32□□□□□ -1.08
CTR9-202ENST00000524523 EPS15P42566 896 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 JAK3P52333 1124 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 STX17P56962 302 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 CDK17Q00537 523 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 KRT76Q01546 638 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 PPATQ06203 517 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 LRMPQ12912 555 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 COASYQ13057 564 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 GIT2Q14161 759 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 LBRQ14739 615 aaKnown RBP8.32□□□□□ -1.08
CTR9-202ENST00000524523 PTPN14Q15678 1187 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 ECM1Q16610 540 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 ZCWPW2Q504Y3 356 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 EFHC2Q5JST6 749 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 RNFT1Q5M7Z0 435 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 ANKRD40Q6AI12 368 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 RNF207Q6ZRF8 634 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 KCNK18Q7Z418 384 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 GPBP1Q86WP2 473 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 SMYD4Q8IYR2 804 aaPredicted RBP8.32□□□□□ -1.08
CTR9-202ENST00000524523 TNS4Q8IZW8 715 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 TC2NQ8N9U0 490 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 KIAA0895Q8NCT3 520 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 REPS2Q8NFH8 660 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 TRPM4Q8TD43 1214 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 NSUN6Q8TEA1 469 aaKnown RBP8.32□□□□□ -1.08
CTR9-202ENST00000524523 GTPBP3Q969Y2 492 aaKnown RBP8.32□□□□□ -1.08
CTR9-202ENST00000524523 PLIN2Q99541 437 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 BAG1Q99933 345 aaPredicted RBP8.32□□□□□ -1.08
CTR9-202ENST00000524523 TUBGCP2Q9BSJ2 902 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 TEX13BQ9BXU2 312 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 GLIS2Q9BZE0 524 aaPredicted RBP8.32□□□□□ -1.08
CTR9-202ENST00000524523 TANGO6Q9C0B7 1094 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 ZSWIM4Q9H7M6 989 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 GGA3Q9NZ52 723 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 FAM184BQ9ULE4 1060 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 CAPN11Q9UMQ6 739 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 DAAM1Q9Y4D1 1078 aa8.32□□□□□ -1.08
CTR9-202ENST00000524523 GRIN3BO60391 1043 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms