RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 MESP2Q0VG99 397 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 GRB10Q13322 594 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 PLS1Q14651 629 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 TTLL4Q14679 1199 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 CERKLQ49MI3 558 aaPredicted RBP8.07□□□□□ -1.12
SDCBP-210ENST00000522843 NAA16Q6N069 864 aaPredicted RBP8.07□□□□□ -1.12
SDCBP-210ENST00000522843 SIAH1Q8IUQ4 282 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 FAM178BQ8IXR5 827 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 SLC43A3Q8NBI5 491 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 GLT1D1Q96MS3 346 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 UIMC1Q96RL1 719 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 MMP19Q99542 508 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 NOC4LQ9BVI4 516 aaKnown RBP8.07□□□□□ -1.12
SDCBP-210ENST00000522843 TRAIPQ9BWF2 469 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 TANGO6Q9C0B7 1094 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 NIF3L1Q9GZT8 377 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 UPF3AQ9H1J1 476 aaKnown RBP8.07□□□□□ -1.12
SDCBP-210ENST00000522843 LRP2BPQ9P2M1 347 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 DIS3Q9Y2L1 958 aaKnown RBP8.07□□□□□ -1.12
SDCBP-210ENST00000522843 SLC4A7Q9Y6M7 1214 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 SPTBN4Q9H254 2564 aa8.07□□□□□ -1.12
SDCBP-210ENST00000522843 PTPRCP08575 1304 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 MROH7Q68CQ1 1323 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 RBAK-RBAKDNI3L0D1 243 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 DUSP11O75319 330 aaKnown RBP8.06□□□□□ -1.12
SDCBP-210ENST00000522843 BAG3O95817 575 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 SLFN14P0C7P3 912 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 IL9P15248 144 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 ATP2A2P16615 1042 aaKnown RBP8.06□□□□□ -1.12
SDCBP-210ENST00000522843 PTGS1P23219 599 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 ITPKAP23677 461 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 MB21D1Q8N884 522 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 REPS2Q8NFH8 660 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.06□□□□□ -1.12
SDCBP-210ENST00000522843 ARNTL2Q8WYA1 636 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 SSH1Q8WYL5 1049 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 SCLYQ96I15 445 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 HRASLS5Q96KN8 279 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 FGD4Q96M96 766 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 NEUROD6Q96NK8 337 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 CITED4Q96RK1 184 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 KRTAP4-11Q9BYQ6 195 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 EHD4Q9H223 541 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 ATXN3LQ9H3M9 355 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 HIPK3Q9H422 1215 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 NPHS2Q9NP85 383 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 PIH1D3Q9NQM4 214 aaKnown RBP8.06□□□□□ -1.12
SDCBP-210ENST00000522843 SERPINB13Q9UIV8 391 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 FAM184BQ9ULE4 1060 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 ADAMTS5Q9UNA0 930 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 DCHS1Q96JQ0 3298 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 MCM3APO60318 1980 aa8.06□□□□□ -1.12
SDCBP-210ENST00000522843 ASTN1O14525 1302 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 SCN5AQ14524 2016 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-210ENST00000522843 SOWAHDA6NJG2 315 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 CPNE3O75131 537 aaKnown RBP8.05□□□□□ -1.12
SDCBP-210ENST00000522843 NEFLP07196 543 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 C6orf222P0C671 652 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-210ENST00000522843 UBTFL1P0CB47 393 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-210ENST00000522843 LIG1P18858 919 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 GJA9P57773 515 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 NKX3-2P78367 333 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 GABPAQ06546 454 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 TMEM67Q5HYA8 995 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 MAMDC4Q6UXC1 1216 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 SMYD4Q8IYR2 804 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-210ENST00000522843 WDR89Q96FK6 387 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-210ENST00000522843 FANCD2OSQ96PS1 177 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 NOL10Q9BSC4 688 aaKnown RBP8.05□□□□□ -1.12
SDCBP-210ENST00000522843 KATNBL1Q9H079 304 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 TRPV6Q9H1D0 765 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 KCNH6Q9H252 994 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 MTIF3Q9H2K0 278 aaKnown RBP8.05□□□□□ -1.12
SDCBP-210ENST00000522843 FBXO28Q9NVF7 368 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 ZHX1Q9UKY1 873 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-210ENST00000522843 ZNF214Q9UL59 606 aaPredicted RBP8.05□□□□□ -1.12
SDCBP-210ENST00000522843 U3KQE9 123 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 C5orf42Q9H799 3197 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 PTPRSQ13332 1948 aa8.05□□□□□ -1.12
SDCBP-210ENST00000522843 TECTAO75443 2155 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 DNAJC25-GNG10A0A024R161 153 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 LRRC10BA6NIK2 292 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 TLR3O15455 904 aaKnown RBP8.04□□□□□ -1.12
SDCBP-210ENST00000522843 FLOT1O75955 427 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 SLC25A27O95847 323 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 OXCT1P55809 520 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 BEX3Q00994 111 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 ID3Q02535 119 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 SLC23A3Q6PIS1 610 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 ATF7IPQ6VMQ6 1270 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 RIOX2Q8IUF8 465 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 SPICE1Q8N0Z3 855 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 MIGA1Q8NAN2 632 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 PCSK9Q8NBP7 692 aaKnown RBP8.04□□□□□ -1.12
SDCBP-210ENST00000522843 PRSS33Q8NF86 280 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 CCDC86Q9H6F5 360 aaKnown RBP8.04□□□□□ -1.12
SDCBP-210ENST00000522843 UBE2ZQ9H832 354 aaPredicted RBP8.04□□□□□ -1.12
SDCBP-210ENST00000522843 FAM53CQ9NYF3 392 aa8.04□□□□□ -1.12
SDCBP-210ENST00000522843 CNPY2Q9Y2B0 182 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms