RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 SMAP1Q8IYB5 467 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC9-213ENST00000522504 RNF216Q9NWF9 866 aaPredicted RBP17.3■□□□□ 0.36
TRAPPC9-213ENST00000522504 AKT3Q9Y243 479 aa17.3■□□□□ 0.36
TRAPPC9-213ENST00000522504 ESYT2A0FGR8 921 aa17.29■□□□□ 0.36
TRAPPC9-213ENST00000522504 CSDE1O75534 798 aaKnown RBP17.29■□□□□ 0.36
TRAPPC9-213ENST00000522504 EIF4BP23588 611 aaKnown RBP17.29■□□□□ 0.36
TRAPPC9-213ENST00000522504 SETQ01105 290 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC9-213ENST00000522504 REXO1Q8N1G1 1221 aaKnown RBP17.29■□□□□ 0.36
TRAPPC9-213ENST00000522504 RNF169Q8NCN4 708 aa17.29■□□□□ 0.36
TRAPPC9-213ENST00000522504 GJA10Q969M2 543 aa17.29■□□□□ 0.36
TRAPPC9-213ENST00000522504 ZNF558Q96NG5 402 aa17.29■□□□□ 0.36
TRAPPC9-213ENST00000522504 FAM86C1Q9NVL1 165 aa17.29■□□□□ 0.36
TRAPPC9-213ENST00000522504 PUF60Q9UHX1 559 aaKnown RBP17.29■□□□□ 0.36
TRAPPC9-213ENST00000522504 NAP1L2Q9ULW6 460 aaPredicted RBP17.29■□□□□ 0.36
TRAPPC9-213ENST00000522504 MAGEB2O15479 319 aa17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 CIITAP33076 1130 aa17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 METAP2P50579 478 aaKnown RBP eCLIP17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 RCAN1P53805 252 aa17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 DRP2Q13474 957 aa17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 BMP2KLQ5H9B9 411 aa17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 TMC7Q7Z402 723 aa17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 ZNF598Q86UK7 904 aaKnown RBP17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 LRRC43Q8N309 656 aa17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 FEZF2Q8TBJ5 459 aa17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 PHKBQ93100 1093 aa17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 NGRNQ9NPE2 291 aaKnown RBP17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 SPG21Q9NZD8 308 aa17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 KMT2EQ8IZD2 1858 aa17.28■□□□□ 0.36
TRAPPC9-213ENST00000522504 FSD2A1L4K1 749 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 C2orf71A6NGG8 1288 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 MSH4O15457 936 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 OATP04181 439 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 DARSP14868 501 aaKnown RBP17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 AVPR2P30518 371 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 GPC3P51654 580 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 PRKCEQ02156 737 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 SLC39A11Q8N1S5 342 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 MRPL43Q8N983 215 aaKnown RBP17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 HELQQ8TDG4 1101 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 MAP7D2Q96T17 732 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 SMOC2Q9H3U7 446 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 POMKQ9H5K3 350 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 C6orf50Q9HD87 102 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 DISC1Q9NRI5 854 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 CEP131Q9UPN4 1083 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 SAMM50Q9Y512 469 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 HCFC2Q9Y5Z7 792 aa17.27■□□□□ 0.36
TRAPPC9-213ENST00000522504 A0A0U1RQF3 1178 aa17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 TMEM150BA6NC51 233 aa17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 WDR64B1ANS9 1081 aa17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 NT5C1B-RDH14C9J2C7 533 aa17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 HOXA2O43364 376 aa17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 PRPF3O43395 683 aaKnown RBP17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 WEE2P0C1S8 567 aa17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 ZSCAN20P17040 1043 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 HOXB8P17481 243 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 PPM1AP35813 382 aa17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 KANK3Q6NY19 840 aa17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 Q6ZUG5 572 aa17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 TMEM173Q86WV6 379 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 ABI1Q8IZP0 508 aa17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 FAM167AQ96KS9 214 aa17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 TSHZ2Q9NRE2 1034 aa17.26■□□□□ 0.35
TRAPPC9-213ENST00000522504 C2CD4DB7Z1M9 353 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 CHMP2AO43633 222 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 CLASP2O75122 1294 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 SRGAP2BP0DMP2 458 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 TMOD1P28289 359 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 KRT17Q04695 432 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 KRT32Q14532 448 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 TARBP2Q15633 366 aaKnown RBP17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 NTRK3Q16288 839 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 C12orf76Q8N812 135 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 KREMEN2Q8NCW0 462 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 AUTS2Q8WXX7 1259 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 BRF1Q92994 677 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 CEP89Q96ST8 783 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 PRRX2Q99811 253 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 ADAM7Q9H2U9 754 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 UNC45AQ9H3U1 944 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 TCEAL9Q9UHQ7 104 aa17.25■□□□□ 0.35
TRAPPC9-213ENST00000522504 STBD1O95210 358 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 BRD1O95696 1058 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 BCAR1P56945 870 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 SMC1AQ14683 1233 aaKnown RBP17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 LONRF3Q496Y0 759 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 MCTP2Q6DN12 878 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 BCL7CQ8WUZ0 217 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 CASP10Q92851 521 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 SLC5A5Q92911 643 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 KCNB2Q92953 911 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 CCDC136Q96JN2 1154 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 RIPOR3Q96MK2 946 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 SH2D3AQ9BRG2 576 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 NRBP2Q9NSY0 501 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 VPS54Q9P1Q0 977 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 NID2Q14112 1375 aa17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 MYH9P35579 1960 aaKnown RBP17.24■□□□□ 0.35
TRAPPC9-213ENST00000522504 CCDC196A0A1B0GTZ2 297 aa17.23■□□□□ 0.35
TRAPPC9-213ENST00000522504 MEIS3P2A8K0S8 358 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms