RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 CASP5P51878 434 aa23.61■■□□□ 1.37
R3HCC1-208ENST00000522012 PEX3P56589 373 aa23.61■■□□□ 1.37
R3HCC1-208ENST00000522012 GRIK4Q16099 956 aa23.61■■□□□ 1.37
R3HCC1-208ENST00000522012 SLC9C1Q4G0N8 1177 aa23.61■■□□□ 1.37
R3HCC1-208ENST00000522012 GUF1Q8N442 669 aaKnown RBP23.61■■□□□ 1.37
R3HCC1-208ENST00000522012 DHTKD1Q96HY7 919 aaPredicted RBP23.61■■□□□ 1.37
R3HCC1-208ENST00000522012 JPH2Q9BR39 696 aaPredicted RBP23.61■■□□□ 1.37
R3HCC1-208ENST00000522012 MTG1Q9BT17 334 aaPredicted RBP23.61■■□□□ 1.37
R3HCC1-208ENST00000522012 COL1A2P08123 1366 aa23.61■■□□□ 1.37
R3HCC1-208ENST00000522012 CCDC85CA6NKD9 419 aa23.6■■□□□ 1.37
R3HCC1-208ENST00000522012 GOLGA6L19H0YKK7 550 aa23.6■■□□□ 1.37
R3HCC1-208ENST00000522012 KLRC1P26715 233 aa23.6■■□□□ 1.37
R3HCC1-208ENST00000522012 MYL5Q02045 173 aa23.6■■□□□ 1.37
R3HCC1-208ENST00000522012 CXCL17Q6UXB2 119 aa23.6■■□□□ 1.37
R3HCC1-208ENST00000522012 LRRC71Q8N4P6 559 aa23.6■■□□□ 1.37
R3HCC1-208ENST00000522012 KLHDC9Q8NEP7 349 aa23.6■■□□□ 1.37
R3HCC1-208ENST00000522012 PPP1R13LQ8WUF5 828 aa23.6■■□□□ 1.37
R3HCC1-208ENST00000522012 ZBTB10Q96DT7 871 aa23.6■■□□□ 1.37
R3HCC1-208ENST00000522012 IFT74Q96LB3 600 aa23.6■■□□□ 1.37
R3HCC1-208ENST00000522012 RWDD2AQ9UIY3 292 aa23.6■■□□□ 1.37
R3HCC1-208ENST00000522012 CCDC169A6NNP5 214 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 HAS3O00219 553 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 GAS2O43903 313 aaKnown RBP23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 KIF20AO95235 890 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 C22orf31O95567 290 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 SMIM10L2AP0DMW4 78 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 SMIM10L2BP0DMW5 78 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 DMP1Q13316 513 aaPredicted RBP23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 KCNA10Q16322 511 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 EFCAB12Q6NXP0 572 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 ZNF720Q7Z2F6 126 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 CTU1Q7Z7A3 348 aaKnown RBP23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 RNF180Q86T96 592 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 NELFCDQ8IXH7 590 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 METTL13Q8N6R0 699 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 RETREG2Q8NC44 543 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 SCFD1Q8WVM8 642 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 TCP11Q8WWU5 503 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 BSNDQ8WZ55 320 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 FIZ1Q96SL8 496 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 C17orf75Q9HAS0 396 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 SETD4Q9NVD3 440 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 IGKV6-21A0A0C4DH24 114 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 RRN3P2A6NIE6 340 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 K7ENM7 598 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 IKBKBO14920 756 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 MAGEB2O15479 319 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 PRPF6O94906 941 aaKnown RBP23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 MYCP01106 439 aaPredicted RBP23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 ARL2P36404 184 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 SMTNP53814 917 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 RTP1P59025 263 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 ZC2HC1CQ53FD0 456 aaPredicted RBP23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 IER5Q5VY09 327 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 STXBP4Q6ZWJ1 553 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 EPM2AIP1Q7L775 607 aaPredicted RBP23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 ENOX1Q8TC92 643 aaKnown RBP23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 MED15Q96RN5 788 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 UNC93B1Q9H1C4 597 aa23.59■■□□□ 1.37
R3HCC1-208ENST00000522012 SLC16A4O15374 487 aa23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 ASGR1P07306 291 aa23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 MAPTP10636 758 aaKnown RBP23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 CST5P28325 142 aaPredicted RBP23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 NPTX2P47972 431 aa23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 MRE11P49959 708 aa23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 DNM2P50570 870 aa23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 DRP2Q13474 957 aa23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 LHX8Q68G74 356 aa23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 MTHFD1LQ6UB35 978 aa23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 PCSK9Q8NBP7 692 aaKnown RBP23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 ASAP3Q8TDY4 903 aa23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 P2RX5Q93086 422 aa23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 KMT5AQ9NQR1 393 aa23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 PCDHB13Q9Y5F0 798 aa23.58■■□□□ 1.36
R3HCC1-208ENST00000522012 NRCAMQ92823 1304 aa23.57■■□□□ 1.36
R3HCC1-208ENST00000522012 CCNE1P24864 410 aa23.57■■□□□ 1.36
R3HCC1-208ENST00000522012 PMS1P54277 932 aaKnown RBP23.57■■□□□ 1.36
R3HCC1-208ENST00000522012 MKRN4PQ13434 485 aaPredicted RBP23.57■■□□□ 1.36
R3HCC1-208ENST00000522012 NCAPHQ15003 741 aa23.57■■□□□ 1.36
R3HCC1-208ENST00000522012 C7orf31Q8N865 590 aa23.57■■□□□ 1.36
R3HCC1-208ENST00000522012 SPIRE2Q8WWL2 714 aa23.57■■□□□ 1.36
R3HCC1-208ENST00000522012 PRPF31Q8WWY3 499 aaKnown RBP23.57■■□□□ 1.36
R3HCC1-208ENST00000522012 SEMA6BQ9H3T3 888 aa23.57■■□□□ 1.36
R3HCC1-208ENST00000522012 SUCLA2Q9P2R7 463 aaPredicted RBP23.57■■□□□ 1.36
R3HCC1-208ENST00000522012 LOXHD1Q8IVV2 1947 aa23.57■■□□□ 1.36
R3HCC1-208ENST00000522012 BICDL2A1A5D9 508 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 TRIM49BA6NDI0 452 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 EIF3DO15371 548 aaKnown RBP eCLIP23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 GLRA2P23416 452 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 CLCN3P51790 818 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 NCKAP1LP55160 1127 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 TPM4P67936 248 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 PPP2R5AQ15172 486 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 TPD52L1Q16890 204 aaPredicted RBP23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 UVSSAQ2YD98 709 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 MARCH8Q5T0T0 291 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 SPATA1Q5VX52 437 aa23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 CCSAPQ6IQ19 270 aaPredicted RBP23.56■■□□□ 1.36
R3HCC1-208ENST00000522012 HAUS6Q7Z4H7 955 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms