RNA–Protein interactions for RNA: ENST00000520480.5

R3HCC1-206, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 3

Gene R3HCC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-206ENST00000520480 SH2D3AQ9BRG2 576 aa16.09■□□□□ 0.17
R3HCC1-206ENST00000520480 RGL1Q9NZL6 768 aa16.09■□□□□ 0.17
R3HCC1-206ENST00000520480 SUCLA2Q9P2R7 463 aaPredicted RBP16.09■□□□□ 0.17
R3HCC1-206ENST00000520480 THEGQ9P2T0 379 aa16.09■□□□□ 0.17
R3HCC1-206ENST00000520480 WNT7AO00755 349 aa16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 MGEA5O60502 916 aa16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 DARSP14868 501 aaKnown RBP16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 ATP2B1P20020 1258 aa16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 MCM7P33993 719 aa16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 RFC5P40937 340 aa16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 CYP4A11Q02928 519 aa16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 DRP2Q13474 957 aa16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 NOSTRINQ8IVI9 506 aa16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 CMTR2Q8IYT2 770 aaKnown RBP16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 ATXN2LQ8WWM7 1075 aaKnown RBP16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 DYDC2Q96IM9 177 aa16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 GCOM2Q9BZD3 368 aaPredicted RBP16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 WRAP73Q9P2S5 460 aaPredicted RBP16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 PCDHB7Q9Y5E2 793 aa16.08■□□□□ 0.16
R3HCC1-206ENST00000520480 H3BNC9 293 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 DLL1O00548 723 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 SLITRK3O94933 977 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 RB1P06400 928 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 ZSCAN20P17040 1043 aaPredicted RBP16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 CTNNB1P35222 781 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 TRAPPC10P48553 1259 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 POLGP54098 1239 aaPredicted RBP16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 NPEPPSP55786 919 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 GPM6BQ13491 265 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 CTTNQ14247 550 aaKnown RBP16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 SKIV2LQ15477 1246 aaKnown RBP16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 PTPROQ16827 1216 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 ZNF410Q86VK4 478 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 TPH2Q8IWU9 490 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 CLP1Q92989 425 aaKnown RBP16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 TMX3Q96JJ7 454 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 HSD17B14Q9BPX1 270 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 EIF2AK1Q9BQI3 630 aaKnown RBP16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 PRDM6Q9NQX0 595 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 NOL7Q9UMY1 257 aaKnown RBP16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 NCOR1O75376 2440 aa16.07■□□□□ 0.16
R3HCC1-206ENST00000520480 BRWD1Q9NSI6 2320 aa16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 ARID2Q68CP9 1835 aa16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 C9IYK1 514 aa16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 C5orf67F2Z3F1 127 aa16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 GAS2O43903 313 aaKnown RBP16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 LYPLA2O95372 231 aa16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 IBSPP21815 317 aaPredicted RBP16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 BMPR1AP36894 532 aa16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 DSC3Q14574 896 aa16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 XKR9Q5GH70 373 aa16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 RHPN2Q8IUC4 686 aa16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 ZNF668Q96K58 619 aaPredicted RBP16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 C11orf84Q9BUA3 381 aaPredicted RBP16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 INO80BQ9C086 356 aaPredicted RBP16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 TMEM60Q9H2L4 133 aa16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 DHX33Q9H6R0 707 aaKnown RBP16.06■□□□□ 0.16
R3HCC1-206ENST00000520480 MUC3AQ02505 3323 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 A0A087WZ62 844 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 OR52Z1P0C646 297 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 SFPQP23246 707 aaKnown RBP eCLIP16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 U2AF2P26368 475 aaKnown RBP eCLIP16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 FAM189BP81408 668 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 ZNF174Q15697 407 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 TJAP1Q5JTD0 557 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 TTC38Q5R3I4 469 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 ZNF579Q8NAF0 562 aaKnown RBP16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 TCP11Q8WWU5 503 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 PSPC1Q8WXF1 523 aaKnown RBP16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 MRPL38Q96DV4 380 aaKnown RBP16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 CCDC43Q96MW1 224 aaKnown RBP16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 FDXACB1Q9BRP7 624 aaPredicted RBP16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 PLVAPQ9BX97 442 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 ELAC1Q9H777 363 aaKnown RBP16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 ATP6V0A4Q9HBG4 840 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 TMEM161AQ9NX61 479 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 COG5Q9UP83 839 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 COL4A3BPQ9Y5P4 624 aa16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 MRPL42Q9Y6G3 142 aaKnown RBP16.05■□□□□ 0.16
R3HCC1-206ENST00000520480 CD2BP2O95400 341 aaKnown RBP16.04■□□□□ 0.16
R3HCC1-206ENST00000520480 LINC00271P0C7V0 271 aa16.04■□□□□ 0.16
R3HCC1-206ENST00000520480 MRPS5P82675 430 aaKnown RBP16.04■□□□□ 0.16
R3HCC1-206ENST00000520480 EMC2Q15006 297 aa16.04■□□□□ 0.16
R3HCC1-206ENST00000520480 AAK1Q2M2I8 961 aa16.04■□□□□ 0.16
R3HCC1-206ENST00000520480 PAN2Q504Q3 1202 aaKnown RBP16.04■□□□□ 0.16
R3HCC1-206ENST00000520480 PRPF31Q8WWY3 499 aaKnown RBP16.04■□□□□ 0.16
R3HCC1-206ENST00000520480 SYMPKQ92797 1274 aaKnown RBP16.04■□□□□ 0.16
R3HCC1-206ENST00000520480 NLRP4Q96MN2 994 aa16.04■□□□□ 0.16
R3HCC1-206ENST00000520480 CHST12Q9NRB3 414 aa16.04■□□□□ 0.16
R3HCC1-206ENST00000520480 ANKEF1Q9NU02 776 aa16.04■□□□□ 0.16
R3HCC1-206ENST00000520480 DACT1Q9NYF0 836 aa16.04■□□□□ 0.16
R3HCC1-206ENST00000520480 FNDC1Q4ZHG4 1894 aaPredicted RBP16.03■□□□□ 0.16
R3HCC1-206ENST00000520480 POTEMA6NI47 508 aa16.03■□□□□ 0.16
R3HCC1-206ENST00000520480 ASAP2O43150 1006 aa16.03■□□□□ 0.16
R3HCC1-206ENST00000520480 HOXA2O43364 376 aa16.03■□□□□ 0.16
R3HCC1-206ENST00000520480 XRCC6P12956 609 aaKnown RBP eCLIP16.03■□□□□ 0.16
R3HCC1-206ENST00000520480 TECP42680 631 aa16.03■□□□□ 0.16
R3HCC1-206ENST00000520480 TIGD5Q53EQ6 642 aa16.03■□□□□ 0.16
R3HCC1-206ENST00000520480 KSR1Q8IVT5 923 aa16.03■□□□□ 0.16
R3HCC1-206ENST00000520480 ERMNQ8TAM6 284 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms