RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 TM4SF4P48230 202 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 CD97P48960 835 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 HMGCS2P54868 508 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 TFAP4Q01664 338 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 PTH1RQ03431 593 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 GABPAQ06546 454 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 IFRD2Q12894 506 aaPredicted RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 ALX1Q15699 326 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 IMMTQ16891 758 aaKnown RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 ZNF423Q2M1K9 1284 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 C2orf27AQ580R0 203 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 C1QTNF12Q5T7M4 302 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 PCNX4Q63HM2 1172 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 TTBK2Q6IQ55 1244 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 CC2D1AQ6P1N0 951 aaPredicted RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 BNC2Q6ZN30 1099 aaPredicted RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 CCDC81Q6ZN84 652 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 MFSD6Q6ZSS7 791 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 TMEM179Q6ZVK1 233 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 FASTKD5Q7L8L6 764 aaKnown RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 SLITRK4Q8IW52 837 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 DRC7Q8IY82 874 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 JMYQ8N9B5 988 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 FBXO27Q8NI29 283 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 ASAP3Q8TDY4 903 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 CHAC2Q8WUX2 184 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 CPLX3Q8WVH0 158 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 BRI3BPQ8WY22 251 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 CHMP4CQ96CF2 233 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 TIFAQ96CG3 184 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 CCDC17Q96LX7 622 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 PTPN18Q99952 460 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 DSCC1Q9BVC3 393 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 RSPH9Q9H1X1 276 aaPredicted RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 CLIP2Q9UDT6 1046 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 ZBTB21Q9ULJ3 1066 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 ISY1Q9ULR0 285 aaKnown RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 NAP1L2Q9ULW6 460 aaPredicted RBP3.19□□□□□ -1.9
SKP1-204ENST00000517691 PCDHB5Q9Y5E4 795 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 PTCH2Q9Y6C5 1203 aa3.19□□□□□ -1.9
SKP1-204ENST00000517691 ZNF646O15015 1829 aaPredicted RBP3.18□□□□□ -1.9
SKP1-204ENST00000517691 COL2A1P02458 1487 aaPredicted RBP3.18□□□□□ -1.9
SKP1-204ENST00000517691 AKAP11Q9UKA4 1901 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 RAD50Q92878 1312 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 FAM221AA4D161 298 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 ALG1L2C9J202 215 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 C19orf81C9J6K1 198 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 BTBD19C9JJ37 291 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 IGF2BP3O00425 579 aaKnown RBP eCLIP3.18□□□□□ -1.9
SKP1-204ENST00000517691 FOXN1O15353 648 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 FOXP2O15409 715 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 CA12O43570 354 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 F13A1P00488 732 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 F2P00734 622 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 EPXP11678 715 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 EEF2P13639 858 aaKnown RBP3.18□□□□□ -1.9
SKP1-204ENST00000517691 SERPINB3P29508 390 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 GUCY1A2P33402 732 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 CTCFP49711 727 aaPredicted RBP3.18□□□□□ -1.9
SKP1-204ENST00000517691 LBX1P52954 281 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 BACE1P56817 501 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 PCBP4P57723 403 aaKnown RBP3.18□□□□□ -1.9
SKP1-204ENST00000517691 RPS26P62854 115 aaKnown RBP3.18□□□□□ -1.9
SKP1-204ENST00000517691 ICA1Q05084 483 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 APOBRQ0VD83 1088 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 TRDNQ13061 729 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 COL9A2Q14055 689 aaPredicted RBP3.18□□□□□ -1.9
SKP1-204ENST00000517691 MORC3Q14149 939 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 MLC1Q15049 377 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 TOMM20Q15388 145 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 TCEA2Q15560 299 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 TM4SF20Q53R12 229 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 AKNAD1Q5T1N1 836 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 ANO1Q5XXA6 986 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 SPATC1Q76KD6 591 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 VN1R5Q7Z5H4 357 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 CLEC10AQ8IUN9 316 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 FAM43AQ8N2R8 423 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 CCDC89Q8N998 374 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 TEX19Q8NA77 164 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 VPS37AQ8NEZ2 397 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 ACER1Q8TDN7 264 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 STK35Q8TDR2 534 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 PLD4Q96BZ4 506 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 WDR18Q9BV38 432 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 IL25Q9H293 177 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 RNF41Q9H4P4 317 aaPredicted RBP3.18□□□□□ -1.9
SKP1-204ENST00000517691 DNAJB12Q9NXW2 375 aaKnown RBP3.18□□□□□ -1.9
SKP1-204ENST00000517691 STX8Q9UNK0 236 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 FRMD4BQ9Y2L6 1034 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 PAPPA2Q9BXP8 1791 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 MYH2Q9UKX2 1941 aa3.18□□□□□ -1.9
SKP1-204ENST00000517691 MYH13Q9UKX3 1938 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 A0A0G2JLL6 359 aaPredicted RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 NMT2O60551 498 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 CYP2C8P10632 490 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 CALRP27797 417 aaKnown RBP3.17□□□□□ -1.9
SKP1-204ENST00000517691 PMLP29590 882 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 NEK2P51955 445 aa3.17□□□□□ -1.9
SKP1-204ENST00000517691 USP14P54578 494 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms