RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 CYP3A4P08684 503 aa17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 FGFR4P22455 802 aa17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 ADD1P35611 737 aaKnown RBP17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 ECHDC2Q86YB7 292 aa17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 RASEFQ8IZ41 740 aa17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 RASGRP4Q8TDF6 673 aa17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 CCDC12Q8WUD4 166 aaPredicted RBP17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 ASIC4Q96FT7 647 aa17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 FAM167AQ96KS9 214 aa17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 FAM217BQ9NTX9 383 aaPredicted RBP17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 RNF19AQ9NV58 838 aa17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 SPG21Q9NZD8 308 aa17.23■□□□□ 0.35
CSGALNACT1-204ENST00000517494 EIF4BP23588 611 aaKnown RBP17.22■□□□□ 0.35
CSGALNACT1-204ENST00000517494 SMC1AQ14683 1233 aaKnown RBP17.22■□□□□ 0.35
CSGALNACT1-204ENST00000517494 TMEM184AQ6ZMB5 413 aa17.22■□□□□ 0.35
CSGALNACT1-204ENST00000517494 TMEM87AQ8NBN3 555 aa17.22■□□□□ 0.35
CSGALNACT1-204ENST00000517494 HELQQ8TDG4 1101 aa17.22■□□□□ 0.35
CSGALNACT1-204ENST00000517494 NLRP7Q8WX94 980 aa17.22■□□□□ 0.35
CSGALNACT1-204ENST00000517494 CASP10Q92851 521 aa17.22■□□□□ 0.35
CSGALNACT1-204ENST00000517494 ATOH1Q92858 354 aaPredicted RBP17.22■□□□□ 0.35
CSGALNACT1-204ENST00000517494 ADAMTS10Q9H324 1103 aa17.22■□□□□ 0.35
CSGALNACT1-204ENST00000517494 NR2E1Q9Y466 385 aa17.22■□□□□ 0.35
CSGALNACT1-204ENST00000517494 FNDC1Q4ZHG4 1894 aaPredicted RBP17.22■□□□□ 0.35
CSGALNACT1-204ENST00000517494 CCDC196A0A1B0GTZ2 297 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 WDR64B1ANS9 1081 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 NT5C1B-RDH14C9J2C7 533 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 PDGFBP01127 241 aaPredicted RBP17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 OATP04181 439 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 CPA1P15085 419 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 HOXB8P17481 243 aaPredicted RBP17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 AVPR2P30518 371 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 PRKCEQ02156 737 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 KCNC3Q14003 757 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 KRT32Q14532 448 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 TPRNQ4KMQ1 711 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 CLLU1OSQ5K130 101 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 CES5AQ6NT32 575 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 KREMEN2Q8NCW0 462 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 CRYGNQ8WXF5 182 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 NRBP2Q9NSY0 501 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 HCFC2Q9Y5Z7 792 aa17.21■□□□□ 0.35
CSGALNACT1-204ENST00000517494 ZDBF2Q9HCK1 2354 aa17.2■□□□□ 0.34
CSGALNACT1-204ENST00000517494 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
CSGALNACT1-204ENST00000517494 GFRA3O60609 400 aa17.2■□□□□ 0.34
CSGALNACT1-204ENST00000517494 CSDE1O75534 798 aaKnown RBP17.2■□□□□ 0.34
CSGALNACT1-204ENST00000517494 WEE2P0C1S8 567 aa17.2■□□□□ 0.34
CSGALNACT1-204ENST00000517494 GNA11P29992 359 aa17.2■□□□□ 0.34
CSGALNACT1-204ENST00000517494 GPC3P51654 580 aa17.2■□□□□ 0.34
CSGALNACT1-204ENST00000517494 AKAP17AQ02040 695 aaKnown RBP17.2■□□□□ 0.34
CSGALNACT1-204ENST00000517494 MCTP2Q6DN12 878 aa17.2■□□□□ 0.34
CSGALNACT1-204ENST00000517494 ZMYND12Q9H0C1 365 aa17.2■□□□□ 0.34
CSGALNACT1-204ENST00000517494 POMKQ9H5K3 350 aa17.2■□□□□ 0.34
CSGALNACT1-204ENST00000517494 DISC1Q9NRI5 854 aa17.2■□□□□ 0.34
CSGALNACT1-204ENST00000517494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 C2orf71A6NGG8 1288 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 C2CD4DB7Z1M9 353 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 H0Y858 1186 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 ST18O60284 1047 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 GAS7O60861 476 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 DARSP14868 501 aaKnown RBP17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 ALDH7A1P49419 539 aaKnown RBP17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 TBC1D8BQ0IIM8 1120 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 MTMR3Q13615 1198 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 BMS1Q14692 1282 aaKnown RBP17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 UGCGQ16739 394 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 LONRF3Q496Y0 759 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 RARS2Q5T160 578 aaKnown RBP17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 Q6ZUG5 572 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 SLC39A11Q8N1S5 342 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 MRPL43Q8N983 215 aaKnown RBP17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 BRF1Q92994 677 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 PHKBQ93100 1093 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 TMEM169Q96HH4 297 aa17.19■□□□□ 0.34
CSGALNACT1-204ENST00000517494 A0A0U1RQF3 1178 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 ZNF862O60290 1169 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 CLASP2O75122 1294 aaKnown RBP17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 ZC3H11AO75152 810 aaKnown RBP eCLIP17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 CXCL14O95715 111 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 HMGB1P09429 215 aaKnown RBP17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 RCAN1P53805 252 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 BCAR1P56945 870 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 BMP2KLQ5H9B9 411 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 LINC01465Q8N7H1 131 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 C12orf76Q8N812 135 aaPredicted RBP17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 BICD2Q8TD16 824 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 AUTS2Q8WXX7 1259 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 GJA10Q969M2 543 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 CCDC136Q96JN2 1154 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 RIPOR3Q96MK2 946 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 NECTIN4Q96NY8 510 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 MRPL9Q9BYD2 267 aaKnown RBP17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 ADAM7Q9H2U9 754 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 DACT1Q9NYF0 836 aa17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 SEPT9Q9UHD8 586 aaPredicted RBP17.18■□□□□ 0.34
CSGALNACT1-204ENST00000517494 SPDYE4A6NLX3 237 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 MSH4O15457 936 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 ITIH3Q06033 890 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 MTERF2Q49AM1 385 aa17.17■□□□□ 0.34
CSGALNACT1-204ENST00000517494 LRCH2Q5VUJ6 765 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms