RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 ITGB5P18084 799 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PDCP20941 246 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PTGS1P23219 599 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 MSX1P28360 303 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 SREBF1P36956 1147 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 USP11P51784 963 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 SP2Q02086 613 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 MTMR1Q13613 665 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 NPY5RQ15761 445 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 LETM2Q2VYF4 491 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 CEP55Q53EZ4 464 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PRR16Q569H4 304 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 BRDTQ58F21 947 aaPredicted RBP6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 EARS2Q5JPH6 523 aaKnown RBP6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 C6orf118Q5T5N4 469 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 RNF180Q86T96 592 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PLA2G4DQ86XP0 818 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 DHX37Q8IY37 1157 aaKnown RBP6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 OR6J1Q8NGC5 347 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 RNF217Q8TC41 542 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 LENG1Q96BZ8 264 aaPredicted RBP6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 CDHR1Q96JP9 859 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 UIMC1Q96RL1 719 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 MXRA8Q9BRK3 442 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 C12orf49Q9H741 205 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 TIMMDC1Q9NPL8 285 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 TMEM63CQ9P1W3 806 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PRKAG2Q9UGJ0 569 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 OGDHLQ9ULD0 1010 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 UBIAD1Q9Y5Z9 338 aa6.57□□□□□ -1.36
SCARNA6.1-201ENST00000516989 FRMPD4Q14CM0 1322 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 KIAA0100Q14667 2235 aaKnown RBP6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 A0A1B0GTH6 734 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 A0A1W2PNR3 127 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 VPS37CA5D8V6 355 aaPredicted RBP6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 FAM86B1E9PN63 330 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 DDX39AO00148 427 aaKnown RBP6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 MEIS1O00470 390 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 NKRFO15226 690 aaKnown RBP eCLIP6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 ADCY6O43306 1168 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 FIBPO43427 364 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 ZEB2O60315 1214 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 CCNT1O60563 726 aaKnown RBP6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 GGPS1O95749 300 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 GH1P01241 217 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 MYL3P08590 195 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 FAM86B2P0C5J1 330 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 ICAM3P32942 547 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 GJA9P57773 515 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 BEX3Q00994 111 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 SP4Q02446 784 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 LAMC2Q13753 1193 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 NEDD9Q14511 834 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 LRRC41Q15345 812 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 ZNF174Q15697 407 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 KCNA10Q16322 511 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 FSCN1Q16658 493 aaKnown RBP6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 ZNF394Q53GI3 561 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 CCDC62Q6P9F0 684 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 CYFIP1Q7L576 1253 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 NEK8Q86SG6 692 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 TLK2Q86UE8 772 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PCSK9Q8NBP7 692 aaKnown RBP6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 FERMT2Q96AC1 680 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 GPRASP2Q96D09 838 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 CEP63Q96MT8 703 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 INPP4AQ96PE3 977 aaPredicted RBP6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 FOXP1Q9H334 677 aaPredicted RBP6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 BCAS3Q9H6U6 928 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 KCNH7Q9NS40 1196 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 Q9Y3F1 56 aa6.56□□□□□ -1.36
SCARNA6.1-201ENST00000516989 MYADML2A6NDP7 307 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 KIF28PB7ZC32 967 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 KBTBD13C9JR72 458 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 NOP56O00567 594 aaKnown RBP6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 EDIL3O43854 480 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 ADAMTS4O75173 837 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 FARP2O94887 1054 aaPredicted RBP6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 TDP2O95551 362 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 EPB42P16452 691 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 CAPN2P17655 700 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 SYT1P21579 422 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 UBA1P22314 1058 aaKnown RBP6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 GRNP28799 593 aaKnown RBP6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 CIITAP33076 1130 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 CHMP4BP1P59074 171 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 RACK1P63244 317 aaKnown RBP6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PRR20EP86478 221 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PRR20CP86479 221 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PRR20DP86480 221 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PRR20BP86481 221 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 PRR20AP86496 221 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 CELF3Q5SZQ8 465 aaKnown RBP6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 NXPE4Q6UWF7 544 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 TRIM67Q6ZTA4 783 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 NECAB2Q7Z6G3 386 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 FERMT3Q86UX7 667 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 GIMAP8Q8ND71 665 aaPredicted RBP6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 KLHDC9Q8NEP7 349 aa6.55□□□□□ -1.36
SCARNA6.1-201ENST00000516989 AFG1LQ8WV93 481 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms