RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 IL12RB1P42701 662 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 SLC16A1P53985 500 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 HTRA3P83110 453 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 SRSF2Q01130 221 aaKnown RBP4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 KCNMB1Q16558 191 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 MAN2A1Q16706 1144 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 CT83Q5H943 113 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 PRAMEF9Q5VWM5 478 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 CYB5RLQ6IPT4 315 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 SRGAP1Q7Z6B7 1085 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 TPH2Q8IWU9 490 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 TTLL6Q8N841 843 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 LINC00482Q8N8I6 264 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 ANO3Q9BYT9 981 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 KCTD10Q9H3F6 313 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 IFT122Q9HBG6 1241 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 DDX21Q9NR30 783 aaKnown RBP eCLIP4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 SCOCQ9UIL1 159 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 SYNPO2Q9UMS6 1093 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 PCDHB6Q9Y5E3 794 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 PCDHA5Q9Y5H7 936 aa4.29□□□□□ -1.72
RNU6-390P-201ENST00000516259 TEX51A0A1B0GUA7 166 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 ANO9A1A5B4 782 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 PLEKHD1A6NEE1 506 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 PRPF3O43395 683 aaKnown RBP4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 OFD1O75665 1012 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 C8BP07358 591 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 CYP2C8P10632 490 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 C5AR1P21730 350 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 THBS2P35442 1172 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 RGS3P49796 1198 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 MALLQ13021 153 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 TCIRG1Q13488 830 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 SKIDA1Q1XH10 827 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 MAP9Q49MG5 647 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 TOR2AQ5JU69 321 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 CCDC62Q6P9F0 684 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 FAM180AQ6UWF9 173 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 BTNL9Q6UXG8 535 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 LIPIQ6XZB0 460 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 TMC6Q7Z403 805 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 THEMISQ8N1K5 641 aaPredicted RBP4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 TSPEARQ8WU66 669 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 HPS3Q969F9 1004 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 COA7Q96BR5 231 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 C1GALT1C1Q96EU7 318 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 SLC39A13Q96H72 371 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 HIST1H2AHQ96KK5 128 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 FAM193BQ96PV7 902 aaPredicted RBP4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 HIST1H2AJQ99878 128 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 SARGQ9BW04 601 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 MTG2Q9H4K7 406 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 RXFP1Q9HBX9 757 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 MAN1C1Q9NR34 630 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 KCND1Q9NSA2 647 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 UCKL1Q9NWZ5 548 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 FTSJ1Q9UET6 329 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 HCFC2Q9Y5Z7 792 aa4.28□□□□□ -1.72
RNU6-390P-201ENST00000516259 LCHNA4D1U4 455 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 VSTM5A8MXK1 200 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 H3BML4 177 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 DTNBO60941 627 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 EIF3JO75822 258 aaKnown RBP4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 PAPLNO95428 1278 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 MC4RP32245 332 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 GALK1P51570 392 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 LGALS4P56470 323 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 NRG3P56975 720 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 ZNF200P98182 395 aaPredicted RBP4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 TRIM25Q14258 630 aaKnown RBP4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 NOLC1Q14978 699 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 ACAP2Q15057 778 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 CLUL1Q15846 466 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 VPS72Q15906 364 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 ADRM1Q16186 407 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 DGKDQ16760 1214 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 MUM1L1Q5H9M0 696 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 TMEM200BQ69YZ2 307 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 UNQ6494/PRO21346Q6UXR6 183 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 CD300LDQ6UXZ3 194 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 USP45Q70EL2 814 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 LDHDQ86WU2 507 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 GLB1L2Q8IW92 636 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 KYQ8NBH2 561 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 SVIPQ8NHG7 77 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 WDR48Q8TAF3 677 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 TGFBRAP1Q8WUH2 860 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 GAB3Q8WWW8 586 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 ERCC4Q92889 916 aaPredicted RBP4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 CLIC6Q96NY7 704 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 TAAR9Q96RI9 348 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 QRSL1Q9H0R6 528 aaKnown RBP4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 GREM2Q9H772 168 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 SLC39A2Q9NP94 309 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 ZFP64Q9NPA5 681 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 ANLNQ9NQW6 1124 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 ARHGAP20Q9P2F6 1191 aa4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 SAP30BPQ9UHR5 308 aaKnown RBP4.27□□□□□ -1.73
RNU6-390P-201ENST00000516259 TUBD1Q9UJT1 453 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms