RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 AP3B2Q13367 1082 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 SLC10A5Q5PT55 438 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 CC2D1AQ6P1N0 951 aaPredicted RBP15.47■□□□□ 0.07
TRIO-222ENST00000515144 SEPT5Q99719 369 aaPredicted RBP15.47■□□□□ 0.07
TRIO-222ENST00000515144 GGPS1O95749 300 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 ACAP3Q96P50 834 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 AP1M1Q9BXS5 423 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 TBC1D22BQ9NU19 505 aa15.47■□□□□ 0.07
TRIO-222ENST00000515144 RBAKQ9NYW8 714 aaPredicted RBP15.46■□□□□ 0.07
TRIO-222ENST00000515144 M0QYV0 167 aa15.46■□□□□ 0.07
TRIO-222ENST00000515144 STAT5BP51692 787 aa15.46■□□□□ 0.07
TRIO-222ENST00000515144 SLC7A5Q01650 507 aa15.46■□□□□ 0.07
TRIO-222ENST00000515144 RUFY4Q6ZNE9 571 aa15.46■□□□□ 0.07
TRIO-222ENST00000515144 PNMA8AQ86V59 439 aaPredicted RBP15.46■□□□□ 0.07
TRIO-222ENST00000515144 MCPH1Q8NEM0 835 aa15.46■□□□□ 0.07
TRIO-222ENST00000515144 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.46■□□□□ 0.079e-7■■■■■ 60.8
TRIO-222ENST00000515144 MICAL3Q7RTP6 2002 aa15.46■□□□□ 0.07
TRIO-222ENST00000515144 MED14O60244 1454 aa15.46■□□□□ 0.07
TRIO-222ENST00000515144 FCGRTP55899 365 aa15.46■□□□□ 0.07
TRIO-222ENST00000515144 CPA4Q9UI42 421 aa15.46■□□□□ 0.07
TRIO-222ENST00000515144 DIP2BQ9P265 1576 aa15.46■□□□□ 0.07
TRIO-222ENST00000515144 PCSK1NQ9UHG2 260 aa15.46■□□□□ 0.07
TRIO-222ENST00000515144 RGPD8O14715 1765 aaPredicted RBP15.46■□□□□ 0.07
TRIO-222ENST00000515144 CDHR2Q9BYE9 1310 aa15.46■□□□□ 0.07
TRIO-222ENST00000515144 RGL2O15211 777 aa15.46■□□□□ 0.06
TRIO-222ENST00000515144 CETPP11597 493 aa15.46■□□□□ 0.06
TRIO-222ENST00000515144 ACOT2P49753 483 aa15.46■□□□□ 0.06
TRIO-222ENST00000515144 MRPS25P82663 173 aaKnown RBP15.46■□□□□ 0.06
TRIO-222ENST00000515144 ANKRD20A3Q5VUR7 823 aa15.46■□□□□ 0.06
TRIO-222ENST00000515144 STYK1Q6J9G0 422 aa15.46■□□□□ 0.06
TRIO-222ENST00000515144 BARHL2Q9NY43 387 aa15.46■□□□□ 0.06
TRIO-222ENST00000515144 IRX4P78413 519 aa15.46■□□□□ 0.06
TRIO-222ENST00000515144 VEPH1Q14D04 833 aa15.46■□□□□ 0.06
TRIO-222ENST00000515144 BRD3Q15059 726 aa15.46■□□□□ 0.06
TRIO-222ENST00000515144 ARHGEF40Q8TER5 1519 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 A8MXQ7 604 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 KRT10P13645 584 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 DGKHQ86XP1 1220 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 SPATA2LQ8IUW3 424 aaPredicted RBP15.45■□□□□ 0.06
TRIO-222ENST00000515144 LRRC71Q8N4P6 559 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 HPS3Q969F9 1004 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 PLA2G4FQ68DD2 849 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 ZNF746Q6NUN9 644 aaPredicted RBP15.45■□□□□ 0.06
TRIO-222ENST00000515144 FRA10AC1Q70Z53 315 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 RAB44Q7Z6P3 723 aaPredicted RBP15.45■□□□□ 0.06
TRIO-222ENST00000515144 GSDMAQ96QA5 445 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 NHEJ1Q9H9Q4 299 aaPredicted RBP15.45■□□□□ 0.06
TRIO-222ENST00000515144 ANAPC7Q9UJX3 599 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 UBE4BO95155 1302 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 SH3GLB2Q9NR46 395 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 PPLO60437 1756 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 PGK2P07205 417 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 LIFRP42702 1097 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 EFCAB13Q8IY85 973 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 AGBL1Q96MI9 1066 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 YIPF2Q9BWQ6 316 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 DYRK4Q9NR20 520 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 PASKQ96RG2 1323 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 NBPF9Q3BBW0 867 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 LINC00301Q8NCQ3 95 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 ACRBPQ8NEB7 543 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 HIP1RO75146 1068 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 TUBB4AP04350 444 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 THPOP40225 353 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 NECTIN1Q15223 517 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 MAP1SQ66K74 1059 aaPredicted RBP15.45■□□□□ 0.06
TRIO-222ENST00000515144 DEFB128Q7Z7B8 93 aa15.45■□□□□ 0.06
TRIO-222ENST00000515144 KLHL8Q9P2G9 620 aaPredicted RBP15.45■□□□□ 0.06
TRIO-222ENST00000515144 KRT76Q01546 638 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 ZBED1O96006 694 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 EEF1GP26641 437 aaKnown RBP15.44■□□□□ 0.06
TRIO-222ENST00000515144 VAMP7P51809 220 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 GRM4Q14833 912 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 OPTNQ96CV9 577 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 HEMGNQ9BXL5 484 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 MTFR1LQ9H019 292 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 ZC3H4Q9UPT8 1303 aaKnown RBP15.44■□□□□ 0.06
TRIO-222ENST00000515144 RPS6KA5O75582 802 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 GUCY1A2P33402 732 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 COASYQ13057 564 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 AMHR2Q16671 573 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 SRBD1Q8N5C6 995 aaKnown RBP15.44■□□□□ 0.06
TRIO-222ENST00000515144 G3BP2Q9UN86 482 aaKnown RBP15.44■□□□□ 0.06
TRIO-222ENST00000515144 NDUFB10O96000 172 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 TCP11X2Q5H9J9 407 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 SYCP2LQ5T4T6 812 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 ANKRD13AQ8IZ07 590 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 SLC35F6Q8N357 371 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.44■□□□□ 0.06
TRIO-222ENST00000515144 ERO1AQ96HE7 468 aa15.44■□□□□ 0.06
TRIO-222ENST00000515144 TOB2Q14106 344 aaPredicted RBP15.43■□□□□ 0.06
TRIO-222ENST00000515144 ERLEC1Q96DZ1 483 aa15.43■□□□□ 0.06
TRIO-222ENST00000515144 RWDD2AQ9UIY3 292 aa15.43■□□□□ 0.06
TRIO-222ENST00000515144 GNA15P30679 374 aa15.43■□□□□ 0.06
TRIO-222ENST00000515144 EIF4A3P38919 411 aaKnown RBP15.43■□□□□ 0.06
TRIO-222ENST00000515144 ENTPD7Q9NQZ7 604 aa15.43■□□□□ 0.06
TRIO-222ENST00000515144 P4HBP07237 508 aaKnown RBP15.43■□□□□ 0.06
TRIO-222ENST00000515144 TMED2Q15363 201 aa15.43■□□□□ 0.06
TRIO-222ENST00000515144 KCTD16Q68DU8 428 aa15.43■□□□□ 0.06
TRIO-222ENST00000515144 RNF180Q86T96 592 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms