RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 METP08581 1390 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 CAPN14A8MX76 684 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 PI4K2BG5E9Z4 385 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 K7ELQ4 463 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 SCAMP3O14828 347 aaKnown RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 DDX58O95786 925 aaKnown RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 CLTAP09496 248 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 SLC5A1P13866 664 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 S100A1P23297 94 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 CFL1P23528 166 aaKnown RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 PSMA4P25789 261 aaKnown RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 GNL1P36915 607 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 RXRGP48443 463 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 AMPHP49418 695 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 CCR3P51677 355 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 MRPL58Q14197 206 aaKnown RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 KRT32Q14532 448 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 SLC44A4Q53GD3 710 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 TJAP1Q5JTD0 557 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 KDELC1Q6UW63 502 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 DTX3Q8N9I9 347 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 PI4K2BQ8TCG2 481 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 GTF3C2Q8WUA4 911 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 BARD1Q99728 777 aaKnown RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 API5Q9BZZ5 524 aaKnown RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 C12orf4Q9NQ89 552 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 FANCLQ9NW38 375 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 WDR35Q9P2L0 1181 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 USP21Q9UK80 565 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 RPH3AQ9Y2J0 694 aaPredicted RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 SLC4A7Q9Y6M7 1214 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 CAPN7Q9Y6W3 813 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 ITIH6Q6UXX5 1313 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 SOWAHDA6NJG2 315 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 PDE8AO60658 829 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 ACTN1P12814 892 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 XRCC5P13010 732 aaKnown RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 ALDH3A1P30838 453 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 SOX5P35711 763 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 RAD52P43351 418 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 PSMC4P43686 418 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 CD97P48960 835 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 AARSP49588 968 aaKnown RBP eCLIP7.81□□□□□ -1.161e-6■□□□□ 8.7
NIPBL-208ENST00000514335 VPS41P49754 854 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 CLCN4P51793 760 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 EVCP57679 992 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 MCL1Q07820 350 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 CCDC14Q49A88 953 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 TMEM132EQ6IEE7 984 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 CCDC62Q6P9F0 684 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 CYB5D1Q6P9G0 228 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 CSGALNACT2Q8N6G5 542 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 LZICQ8WZA0 190 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 BRF1Q92994 677 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 DHX58Q96C10 678 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 ACSBG1Q96GR2 724 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 GHITMQ9H3K2 345 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 SEC63Q9UGP8 760 aaKnown RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 SATB2Q9UPW6 733 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 USP20Q9Y2K6 914 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 RTCBQ9Y3I0 505 aaKnown RBP7.81□□□□□ -1.16
NIPBL-208ENST00000514335 SHANK3Q9BYB0 1731 aa7.81□□□□□ -1.16
NIPBL-208ENST00000514335 COBLO75128 1261 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 ATP4AP20648 1035 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 CCT6AP40227 531 aaKnown RBP7.8□□□□□ -1.16
NIPBL-208ENST00000514335 FNTAP49354 379 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 EXOSC10Q01780 885 aaKnown RBP7.8□□□□□ -1.16
NIPBL-208ENST00000514335 STIM1Q13586 685 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 SLC45A4Q5BKX6 768 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 STXBP5Q5T5C0 1151 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 HHIPL2Q6UWX4 724 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 BNC2Q6ZN30 1099 aaPredicted RBP7.8□□□□□ -1.16
NIPBL-208ENST00000514335 ZNF704Q6ZNC4 412 aaPredicted RBP7.8□□□□□ -1.16
NIPBL-208ENST00000514335 GALNT13Q8IUC8 556 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 LSMEM1Q8N8F7 131 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 KCNH5Q8NCM2 988 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 SHC3Q92529 594 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 RELTQ969Z4 430 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 SGK3Q96BR1 496 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 PLIN2Q99541 437 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 RIOK1Q9BRS2 568 aaKnown RBP7.8□□□□□ -1.16
NIPBL-208ENST00000514335 HACD3Q9P035 362 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 PYCARDQ9ULZ3 195 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 NUP155O75694 1391 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 MON2Q7Z3U7 1717 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 FYB1O15117 783 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 USP2O75604 605 aaPredicted RBP7.8□□□□□ -1.16
NIPBL-208ENST00000514335 HPGDP15428 266 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 ASMTP46597 345 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 ARFIP1P53367 373 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 TFAP4Q01664 338 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 CLUL1Q15846 466 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 SIGIRRQ6IA17 410 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 ARHGAP36Q6ZRI8 547 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 TOGARAM2Q6ZUX3 1019 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 RUFY3Q7L099 469 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 OTOP3Q7RTS5 596 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 REM2Q8IYK8 340 aaPredicted RBP7.8□□□□□ -1.16
NIPBL-208ENST00000514335 SLC38A6Q8IZM9 456 aa7.8□□□□□ -1.16
NIPBL-208ENST00000514335 ANKRD35Q8N283 1001 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms