RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 PRDM6Q9NQX0 595 aa10.86□□□□□ -0.67
TRIO-220ENST00000512979 FNDC3AQ9Y2H6 1198 aaKnown RBP10.86□□□□□ -0.67
TRIO-220ENST00000512979 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.86□□□□□ -0.67
TRIO-220ENST00000512979 V9GY48 417 aaPredicted RBP10.86□□□□□ -0.67
TRIO-220ENST00000512979 SCN5AQ14524 2016 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 UNC80Q8N2C7 3258 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 CCDC69A6NI79 296 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 HAS3O00219 553 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 SH2B2O14492 632 aaPredicted RBP10.85□□□□□ -0.67
TRIO-220ENST00000512979 SLC27A2O14975 620 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 PPFIA4O75335 1185 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 BAIAP3O94812 1187 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 CA3P07451 260 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 TGFB3P10600 412 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 CKBP12277 381 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 MCM5P33992 734 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 ZNF200P98182 395 aaPredicted RBP10.85□□□□□ -0.67
TRIO-220ENST00000512979 CCDC85BQ15834 202 aaPredicted RBP10.85□□□□□ -0.67
TRIO-220ENST00000512979 GNPTABQ3T906 1256 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 PRICKLE2Q7Z3G6 844 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 BTLAQ7Z6A9 289 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 FAM177A1Q8N128 213 aaPredicted RBP10.85□□□□□ -0.67
TRIO-220ENST00000512979 SMARCC2Q8TAQ2 1214 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 PHOSPHO2Q8TCD6 241 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 SNX29Q8TEQ0 813 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 RRP36Q96EU6 259 aaKnown RBP10.85□□□□□ -0.67
TRIO-220ENST00000512979 LZTS2Q9BRK4 669 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 MTA3Q9BTC8 594 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 SPZ1Q9BXG8 430 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 NEUROD4Q9HD90 331 aa10.85□□□□□ -0.67
TRIO-220ENST00000512979 SEC63Q9UGP8 760 aaKnown RBP10.85□□□□□ -0.67
TRIO-220ENST00000512979 FRMPD4Q14CM0 1322 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 KIF28PB7ZC32 967 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 PLEKHA8P1O95397 391 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 PARNO95453 639 aaKnown RBP10.84□□□□□ -0.67
TRIO-220ENST00000512979 RXRAP19793 462 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 KCNJ6P48051 423 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 GNAQP50148 359 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 MRPS9P82933 396 aaKnown RBP10.84□□□□□ -0.67
TRIO-220ENST00000512979 RBL2Q08999 1139 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 COL9A3Q14050 684 aaPredicted RBP10.84□□□□□ -0.67
TRIO-220ENST00000512979 GPNMBQ14956 572 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 CREB3L3Q68CJ9 461 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 USP17L6PQ6QN14 398 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 LRRC69Q6ZNQ3 347 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 RAB11FIP4Q86YS3 637 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 HERC6Q8IVU3 1022 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 TMTC2Q8N394 836 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 CUL5Q93034 780 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 TMEM87BQ96K49 555 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 OSBPL7Q9BZF2 842 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 C12orf49Q9H741 205 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 CERS4Q9HA82 394 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 RTEL1Q9NZ71 1219 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 KCNMB2Q9Y691 235 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 TANC1Q9C0D5 1861 aa10.84□□□□□ -0.67
TRIO-220ENST00000512979 NOP56O00567 594 aaKnown RBP10.83□□□□□ -0.68
TRIO-220ENST00000512979 NBNO60934 754 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 STAM2O75886 525 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 UPP2O95045 317 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 CXCL10P02778 98 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 LGALS2P05162 132 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 SMARCA1P28370 1054 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 ICAM3P32942 547 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 LIFRP42702 1097 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 WDR5P61964 334 aaKnown RBP10.83□□□□□ -0.68
TRIO-220ENST00000512979 NEDD9Q14511 834 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 TRIM71Q2Q1W2 868 aaKnown RBP10.83□□□□□ -0.68
TRIO-220ENST00000512979 ZNF394Q53GI3 561 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 ARSJQ5FYB0 599 aaPredicted RBP10.83□□□□□ -0.68
TRIO-220ENST00000512979 PDE12Q6L8Q7 609 aaKnown RBP10.83□□□□□ -0.68
TRIO-220ENST00000512979 CNKSR3Q6P9H4 555 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 METTL7BQ6UX53 244 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 CYFIP1Q7L576 1253 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 MICALL1Q8N3F8 863 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 SRBD1Q8N5C6 995 aaKnown RBP10.83□□□□□ -0.68
TRIO-220ENST00000512979 TET1Q8NFU7 2136 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 WNT8BQ93098 351 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 INPP4AQ96PE3 977 aaPredicted RBP10.83□□□□□ -0.68
TRIO-220ENST00000512979 C16orf70Q9BSU1 422 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 LRRC2Q9BYS8 371 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 BCAS3Q9H6U6 928 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 THEGQ9P2T0 379 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 SLC12A7Q9Y666 1083 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 EYSQ5T1H1 3165 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 TRIP12Q14669 1992 aaPredicted RBP10.83□□□□□ -0.68
TRIO-220ENST00000512979 GBF1Q92538 1859 aa10.83□□□□□ -0.68
TRIO-220ENST00000512979 C17orf102A2RUQ5 167 aa10.82□□□□□ -0.68
TRIO-220ENST00000512979 RFXAPO00287 272 aa10.82□□□□□ -0.68
TRIO-220ENST00000512979 MEIS2O14770 477 aa10.82□□□□□ -0.68
TRIO-220ENST00000512979 FIBPO43427 364 aa10.82□□□□□ -0.68
TRIO-220ENST00000512979 PHACTR2O75167 634 aa10.82□□□□□ -0.68
TRIO-220ENST00000512979 CALM1P0DP23 149 aa10.82□□□□□ -0.68
TRIO-220ENST00000512979 CALM2P0DP24 149 aa10.82□□□□□ -0.68
TRIO-220ENST00000512979 CALM3P0DP25 149 aa10.82□□□□□ -0.68
TRIO-220ENST00000512979 THPOP40225 353 aa10.82□□□□□ -0.68
TRIO-220ENST00000512979 NECTIN1Q15223 517 aa10.82□□□□□ -0.68
TRIO-220ENST00000512979 ZNF618Q5T7W0 954 aa10.82□□□□□ -0.68
TRIO-220ENST00000512979 TMCO2Q7Z6W1 182 aaPredicted RBP10.82□□□□□ -0.68
TRIO-220ENST00000512979 SKAP1Q86WV1 359 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms