RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ZXDCQ2QGD7 858 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 NUTM2DQ5VT03 806 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 C9orf131Q5VYM1 1079 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SASS6Q6UVJ0 657 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 RGS9BPQ6ZS82 235 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCDC117Q8IWD4 279 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 TXLNBQ8N3L3 684 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 GLIS1Q8NBF1 620 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 FAM200AQ8TCP9 573 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZNF526Q8TF50 670 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 FERMT2Q96AC1 680 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 HES6Q96HZ4 224 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 GPATCH3Q96I76 525 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 TMEM109Q9BVC6 243 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 HPCAL4Q9UM19 191 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SPG7Q9UQ90 795 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ATP6V1DQ9Y5K8 247 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 RALGAPA1Q6GYQ0 2036 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 HERC2O95714 4834 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SACSQ9NZJ4 4579 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ASXL3Q9C0F0 2248 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CREBBPQ92793 2442 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 DDX11L8A8MPP1 907 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 BECN2A8MW95 431 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 IGF2BP3O00425 579 aaKnown RBP eCLIP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CXCL11O14625 94 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 IRS4O14654 1257 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 TYROBPO43914 113 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZPR1O75312 459 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 LRIG2O94898 1065 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCNB1P14635 433 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 PRLRP16471 622 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 GUCY2CP25092 1073 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 IARSP41252 1262 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 MAGEA12P43365 314 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ETF1P62495 437 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ATP2C1P98194 919 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 FANCCQ00597 558 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 MAP3K12Q12852 859 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 GRAPQ13588 217 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 C16orf72Q14CZ0 275 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 DHRS4L2Q6PKH6 230 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 KSR2Q6VAB6 950 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 DAGLBQ8NCG7 672 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 RAB3IL1Q8TBN0 382 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 GRAPLQ8TC17 118 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 COG1Q8WTW3 980 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SYTL4Q96C24 671 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CFAP36Q96G28 342 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 MMS19Q96T76 1030 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 PIDD1Q9HB75 910 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 USP3Q9Y6I4 520 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SOWAHDA6NJG2 315 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 PATL2C9JE40 543 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 VARSP26640 1264 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CNGA1P29973 690 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 GABPB1Q06547 395 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CHD3Q12873 2000 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 PYCR3Q53H96 274 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 FKBP15Q5T1M5 1219 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 BTNL9Q6UXG8 535 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 NUTM1Q86Y26 1132 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 FAM114A1Q8IWE2 563 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ADSSL1Q8N142 457 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CLASRPQ8N2M8 674 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 GIMAP8Q8ND71 665 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 DRC1Q96MC2 740 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 DOK1Q99704 481 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 XPO4Q9C0E2 1151 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 MCOLN1Q9GZU1 580 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 EHD2Q9NZN4 543 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 NXF1Q9UBU9 619 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 NOCTQ9UK39 431 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZNF330Q9Y3S2 320 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SQORQ9Y6N5 450 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 KLHL33A6NCF5 533 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 LOC730098B7Z3J9 87 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 E5RJQ4 531 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SEC31AO94979 1220 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 TXLNAP40222 546 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 TECP42680 631 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ECE1P42892 770 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 PIP4K2AP48426 406 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 AMPHP49418 695 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ADCY7P51828 1080 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ERVK-9P63128 1117 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ASIC2Q16515 512 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SETMARQ53H47 684 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 MYSM1Q5VVJ2 828 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SAMD1Q6SPF0 538 aaPredicted RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 MICALCLQ6ZW33 695 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 OTOP1Q7RTM1 612 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SRBD1Q8N5C6 995 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 EIF1ADQ8N9N8 165 aaKnown RBP1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCDC148Q8NFR7 591 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ERMNQ8TAM6 284 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 TMC2Q8TDI7 906 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 ADAMTS16Q8TE57 1224 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 SPOCK2Q92563 424 aa1.85□□□□□ -2.11
TRAPPC13-211ENST00000512009 GOLGA1Q92805 767 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms