RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 CYP27A1Q02318 531 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 CCDC15Q0P6D6 951 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 NKX1-1Q15270 411 aaPredicted RBP6.18□□□□□ -1.42
USP38-203ENST00000511739 TMED2Q15363 201 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 SH3TC2Q8TF17 1288 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 STAP1Q9ULZ2 295 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 L3MBTL1Q9Y468 752 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 SUPT3HB4E1H0 165 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 hCG_1984214I3L0E3 225 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 PFKFB2O60825 505 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 TRPA1O75762 1119 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 TFRCP02786 760 aaKnown RBP6.18□□□□□ -1.42
USP38-203ENST00000511739 APOA4P06727 396 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 ADD1P35611 737 aaKnown RBP6.18□□□□□ -1.42
USP38-203ENST00000511739 JAK3P52333 1124 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 DPYDQ12882 1025 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 ALCAMQ13740 583 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 LLGL1Q15334 1064 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 UBE3CQ15386 1083 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 PHKG1Q16816 387 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 SLC27A3Q5K4L6 730 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 CLEC17AQ6ZS10 378 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 HAUS6Q7Z4H7 955 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 OR9Q1Q8NGQ5 310 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 DPF3Q92784 378 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 NAF1Q96HR8 494 aaKnown RBP6.18□□□□□ -1.42
USP38-203ENST00000511739 CNOT6LQ96LI5 555 aaKnown RBP6.18□□□□□ -1.42
USP38-203ENST00000511739 PIGSQ96S52 555 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 COA1Q9GZY4 146 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 CACNA2D2Q9NY47 1150 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 PCDHA4Q9UN74 947 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 JRKLQ9Y4A0 524 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 MYO3BQ8WXR4 1341 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 SLIT1O75093 1534 aa6.18□□□□□ -1.42
USP38-203ENST00000511739 GOLGA8IPA6NC78 632 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 GOLGA8JA6NMD2 632 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 USP17L5A8MUK1 530 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 IPO5O00410 1097 aaKnown RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 PRRG1O14668 218 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 PDE8BO95263 885 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 ZNF75DP51815 510 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 RASSF7Q02833 373 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 CDC37Q16543 378 aaPredicted RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 SYTL3Q4VX76 610 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 RASIP1Q5U651 963 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 SNRNP48Q6IEG0 339 aaKnown RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 RMDN1Q96DB5 314 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 MTBPQ96DY7 904 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 SERPINI1Q99574 410 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 KDM4CQ9H3R0 1056 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 MED23Q9ULK4 1368 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 UBA6A0AVT1 1052 aaPredicted RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 SUN1O94901 812 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 TCF3P15923 654 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 PFKFB1P16118 471 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 MAP4P27816 1152 aaKnown RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 PEX3P56589 373 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 SKOR1P84550 965 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 ZNF235Q14590 738 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 PROSER3Q2NL68 480 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 IFNLR1Q8IU57 520 aaPredicted RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 MFN1Q8IWA4 741 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 TTC8Q8TAM2 541 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 TBCKQ8TEA7 893 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 FAF2Q96CS3 445 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 RMDN3Q96TC7 470 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 KLC2Q9H0B6 622 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 STN1Q9H668 368 aaKnown RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 ATP6V0A4Q9HBG4 840 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 ZFYVE28Q9HCC9 887 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 OGFRQ9NZT2 677 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.17□□□□□ -1.42
USP38-203ENST00000511739 USP42Q9H9J4 1324 aaKnown RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 PLEKHG2Q9H7P9 1386 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 CEP170BQ9Y4F5 1589 aaPredicted RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 SPDYE5A6NIY4 337 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 H7C1W4 665 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 TADA2AO75478 443 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 ALDH1A2O94788 518 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 HSPA4LO95757 839 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 PSMA3P25788 255 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 HOXA13P31271 388 aaPredicted RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 PHKA1P46020 1223 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 ATXN3P54252 364 aaPredicted RBP6.17□□□□□ -1.42
USP38-203ENST00000511739 KCNQ4P56696 695 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 PRAMEP78395 509 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 SPDYE7PQ495Y7 208 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 ZMYM1Q5SVZ6 1142 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 ANKRD13CQ8N6S4 541 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 ZFYVE19Q96K21 471 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 AK8Q96MA6 479 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 KIFC3Q9BVG8 833 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 TSSK1BQ9BXA7 367 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 ANKRD26Q9UPS8 1709 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 C1orf167Q5SNV9 1468 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 GOLGA8KD6RF30 607 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 NBPF20Q3BBV1 942 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 ZNF394Q53GI3 561 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 TJAP1Q5JTD0 557 aa6.17□□□□□ -1.42
USP38-203ENST00000511739 NBPF10Q6P3W6 841 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms