RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 PTPAQ15257 358 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 RAB30Q15771 203 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 ECM1Q16610 540 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 HYIQ5T013 277 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 ZNF410Q86VK4 478 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 HERC6Q8IVU3 1022 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 MCPH1Q8NEM0 835 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 PRPF31Q8WWY3 499 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 ZNF668Q96K58 619 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 NLRP4Q96MN2 994 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 ZBED2Q9BTP6 218 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 MMTAG2Q9BU76 263 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 GCOM2Q9BZD3 368 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 INO80BQ9C086 356 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 NT5C3AQ9H0P0 336 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 ATP6V0A4Q9HBG4 840 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 ERVK-5Q9HDB9 667 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 BMP2KQ9NSY1 1161 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 DDX19AQ9NUU7 478 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 MSRAQ9UJ68 235 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 ST3GAL5Q9UNP4 418 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 NOC2LQ9Y3T9 749 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 PCDHA11Q9Y5I1 949 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 SRPRBQ9Y5M8 271 aaKnown RBP7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 COL4A3BPQ9Y5P4 624 aa7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 MORC2Q9Y6X9 1032 aaPredicted RBP7.96□□□□□ -1.14
PDLIM5-215ENST00000511586 A0A087WZ62 844 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 RBAK-RBAKDNI3L0D1 243 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 TLL1O43897 1013 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 USO1O60763 962 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 EYA4O95677 639 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 SRGAP2CP0DJJ0 459 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 CYP11B2P19099 503 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 DNAJB2P25686 324 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 MARCKSP29966 332 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 PBX2P40425 430 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 UBA7P41226 1012 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 NASPP49321 788 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 RABGGTBP53611 331 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 POU5F1BQ06416 359 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 LAMTOR4Q0VGL1 99 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 PKP1Q13835 747 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 ZRSR1Q15695 479 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 ATL3Q6DD88 541 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 PADI6Q6TGC4 694 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 CABP7Q86V35 215 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 FAM228AQ86W67 206 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 KSR1Q8IVT5 923 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 MYOCDQ8IZQ8 938 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 TOP1MTQ969P6 601 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 TIFAQ96CG3 184 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 CALML4Q96GE6 196 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 CDK5RAP3Q96JB5 506 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 USP28Q96RU2 1077 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 FDXACB1Q9BRP7 624 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 PBX4Q9BYU1 374 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 BHMT2Q9H2M3 363 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 XPNPEP1Q9NQW7 623 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 TFIP11Q9UBB9 837 aaKnown RBP7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 FBXO2Q9UK22 296 aaPredicted RBP7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 INSL6Q9Y581 213 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 WDR81Q562E7 1941 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 LAMA3Q16787 3333 aa7.95□□□□□ -1.14
PDLIM5-215ENST00000511586 TET1Q8NFU7 2136 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 TMEM265A0A087WTH1 108 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 DENND3A2RUS2 1198 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 E9PMD0 336 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 PPP6R2O75170 966 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 GJB5O95377 273 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 YEATS4O95619 227 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 BRD1O95696 1058 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 ZSCAN20P17040 1043 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 SFPQP23246 707 aaKnown RBP eCLIP7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 ARL2P36404 184 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 PHKA2P46019 1235 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 GRIN1Q05586 938 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 GRB10Q13322 594 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 TFDP1Q14186 410 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 STK38Q15208 465 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 FAM102BQ5T8I3 360 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 ZNF697Q5TEC3 545 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 FAM117BQ6P1L5 589 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 MAEAQ7L5Y9 396 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 KCNK18Q7Z418 384 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 SRGAP1Q7Z6B7 1085 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 TMCO2Q7Z6W1 182 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 RTN4RL1Q86UN2 441 aaPredicted RBP7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 KRI1Q8N9T8 703 aaKnown RBP7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 RNF149Q8NC42 400 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 LINC00301Q8NCQ3 95 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 RASSF8Q8NHQ8 419 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 PNMA5Q96PV4 448 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 PLIN2Q99541 437 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 RAD9AQ99638 391 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 ADAM2Q99965 735 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 CCSER1Q9C0I3 900 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 CSRNP2Q9H175 543 aa7.94□□□□□ -1.14
PDLIM5-215ENST00000511586 POLR3FQ9H1D9 316 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms