RNA–Protein interactions for RNA: ENST00000509599.5

PTPN20-221, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-221ENST00000509599 IGSF10Q6WRI0 2623 aa11.17□□□□□ -0.62
PTPN20-221ENST00000509599 EVPLQ92817 2033 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 TSPY2A6NKD2 308 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 TAF4O00268 1085 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 LAMTOR5O43504 91 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 TBC1D4O60343 1298 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 PDHBP11177 359 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 LAG3P18627 525 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 PBX3P40426 434 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 MRPS6P82932 125 aaKnown RBP11.16□□□□□ -0.62
PTPN20-221ENST00000509599 SMC1AQ14683 1233 aaKnown RBP11.16□□□□□ -0.62
PTPN20-221ENST00000509599 ZSCAN25Q6NSZ9 544 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 GPR149Q86SP6 731 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 GPIHBP1Q8IV16 184 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 IFNL3Q8IZI9 196 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 SLC44A3Q8N4M1 653 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 SLC27A5Q9Y2P5 690 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 TELO2Q9Y4R8 837 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 PCDHB7Q9Y5E2 793 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 SQORQ9Y6N5 450 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 BPTFQ12830 3046 aa11.16□□□□□ -0.62
PTPN20-221ENST00000509599 SDK1Q7Z5N4 2213 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 SMG1Q96Q15 3661 aaKnown RBP11.15□□□□□ -0.62
PTPN20-221ENST00000509599 SRRM3A6NNA2 597 aaPredicted RBP11.15□□□□□ -0.62
PTPN20-221ENST00000509599 CYSRT1A8MQ03 144 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 GPAA1O43292 621 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 MGEA5O60502 916 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 APPP05067 770 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 IFIT2P09913 472 aaKnown RBP11.15□□□□□ -0.62
PTPN20-221ENST00000509599 TGFB3P10600 412 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 MYCLP12524 364 aaPredicted RBP11.15□□□□□ -0.62
PTPN20-221ENST00000509599 GCGRP47871 477 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 PPARAQ07869 468 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 ZNF543Q08ER8 600 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 DCLRE1AQ6PJP8 1040 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 KCNT2Q6UVM3 1135 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 LRRC55Q6ZSA7 311 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 RSPH3Q86UC2 560 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 CLASRPQ8N2M8 674 aaKnown RBP11.15□□□□□ -0.62
PTPN20-221ENST00000509599 IL31RAQ8NI17 732 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 SLC22A17Q8WUG5 538 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 DDX1Q92499 740 aaKnown RBP11.15□□□□□ -0.62
PTPN20-221ENST00000509599 THAP11Q96EK4 314 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 CPVLQ9H3G5 476 aa11.15□□□□□ -0.62
PTPN20-221ENST00000509599 ABCB11O95342 1321 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 IGSF9BQ9UPX0 1349 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 MBLAC1A4D2B0 266 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-221ENST00000509599 NOP56O00567 594 aaKnown RBP11.14□□□□□ -0.63
PTPN20-221ENST00000509599 ST8SIA5O15466 376 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 HSPD1P10809 573 aaKnown RBP11.14□□□□□ -0.63
PTPN20-221ENST00000509599 STARD6P59095 220 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 PAK2Q13177 524 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 LPAL2Q16609 132 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 LETM2Q2VYF4 491 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 MARCH8Q5T0T0 291 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 UTP14CQ5TAP6 766 aaKnown RBP11.14□□□□□ -0.63
PTPN20-221ENST00000509599 CEP85Q6P2H3 762 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 PRR23CQ6ZRP0 262 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 TMEM47Q9BQJ4 181 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 PDCD2LQ9BRP1 358 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 BCL11AQ9H165 835 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 PKD2L1Q9P0L9 805 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 TUBE1Q9UJT0 475 aa11.14□□□□□ -0.63
PTPN20-221ENST00000509599 ZNF215Q9UL58 517 aaPredicted RBP11.14□□□□□ -0.63
PTPN20-221ENST00000509599 SPAG17Q6Q759 2223 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 PATL2C9JE40 543 aaKnown RBP11.13□□□□□ -0.63
PTPN20-221ENST00000509599 M0R2C6 588 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 TM4SF5O14894 197 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 IPO8O15397 1037 aaKnown RBP11.13□□□□□ -0.63
PTPN20-221ENST00000509599 LRP3O75074 770 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 SLC3A2P08195 630 aaKnown RBP11.13□□□□□ -0.63
PTPN20-221ENST00000509599 FGFR1P11362 822 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 TOP1P11387 765 aaKnown RBP11.13□□□□□ -0.63
PTPN20-221ENST00000509599 GNAT2P19087 354 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 KRT17Q04695 432 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 NONOQ15233 471 aaKnown RBP eCLIP11.13□□□□□ -0.63
PTPN20-221ENST00000509599 PTPN14Q15678 1187 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 TMEM266Q2M3C6 531 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 TSSK4Q6SA08 328 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 VSIG10LQ86VR7 867 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 MCF2L2Q86YR7 1114 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 FAM160A2Q8N612 972 aaPredicted RBP11.13□□□□□ -0.63
PTPN20-221ENST00000509599 APPBP2Q92624 585 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 MAP4K1Q92918 833 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 BCO2Q9BYV7 579 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 SFXN1Q9H9B4 322 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 PRDM9Q9NQV7 894 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 SEMA4GQ9NTN9 838 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 SPG21Q9NZD8 308 aa11.13□□□□□ -0.63
PTPN20-221ENST00000509599 MTCL1Q9Y4B5 1905 aaKnown RBP11.13□□□□□ -0.63
PTPN20-221ENST00000509599 C9IYK1 514 aa11.12□□□□□ -0.63
PTPN20-221ENST00000509599 OPLAHO14841 1288 aa11.12□□□□□ -0.63
PTPN20-221ENST00000509599 CXCL14O95715 111 aa11.12□□□□□ -0.63
PTPN20-221ENST00000509599 SNHG28P0DPA3 235 aa11.12□□□□□ -0.63
PTPN20-221ENST00000509599 PPM1AP35813 382 aa11.12□□□□□ -0.63
PTPN20-221ENST00000509599 RPIAP49247 311 aa11.12□□□□□ -0.63
PTPN20-221ENST00000509599 CTDSPL2Q05D32 466 aa11.12□□□□□ -0.63
PTPN20-221ENST00000509599 TMEM62Q0P6H9 643 aa11.12□□□□□ -0.63
PTPN20-221ENST00000509599 PPFIA1Q13136 1202 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms