RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 BFSP2Q13515 415 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 SF3A1Q15459 793 aaKnown RBP8.19□□□□□ -1.1
TRIO-213ENST00000509354 FOXD4L6Q3SYB3 417 aaPredicted RBP8.19□□□□□ -1.1
TRIO-213ENST00000509354 EARS2Q5JPH6 523 aaKnown RBP8.19□□□□□ -1.1
TRIO-213ENST00000509354 ZNF618Q5T7W0 954 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 FOXD4L3Q6VB84 417 aaPredicted RBP8.19□□□□□ -1.1
TRIO-213ENST00000509354 SERINC5Q86VE9 423 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 CCDC155Q8N6L0 562 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 RETREG2Q8NC44 543 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 CAGE1Q8TC20 777 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 AFAP1L1Q8TED9 768 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 LMBR1Q8WVP7 490 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 CRYGNQ8WXF5 182 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 MYLIPQ8WY64 445 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 TIGD1Q96MW7 591 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 PCYT2Q99447 389 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 PBX4Q9BYU1 374 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 OSBPL7Q9BZF2 842 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 ZMYND15Q9H091 742 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 NKX2-4Q9H2Z4 354 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 GOLPH3LQ9H4A5 285 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 CLSTN2Q9H4D0 955 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 AGO4Q9HCK5 861 aaKnown RBP8.19□□□□□ -1.1
TRIO-213ENST00000509354 KCNH7Q9NS40 1196 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 SETD4Q9NVD3 440 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 FBXO2Q9UK22 296 aaPredicted RBP8.19□□□□□ -1.1
TRIO-213ENST00000509354 KCNJ14Q9UNX9 436 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 YBX2Q9Y2T7 364 aaKnown RBP8.19□□□□□ -1.1
TRIO-213ENST00000509354 PRRC2BQ5JSZ5 2229 aaKnown RBP8.19□□□□□ -1.1
TRIO-213ENST00000509354 BRWD1Q9NSI6 2320 aa8.19□□□□□ -1.1
TRIO-213ENST00000509354 RALGAPA2Q2PPJ7 1873 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.18□□□□□ -1.1
TRIO-213ENST00000509354 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.18□□□□□ -1.1
TRIO-213ENST00000509354 GOLGA6L3A6NEY3 463 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 MEIS1O00470 390 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 EDIL3O43854 480 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 NBNO60934 754 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 ARHGEF15O94989 841 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 XRCC6P12956 609 aaKnown RBP eCLIP8.18□□□□□ -1.1
TRIO-213ENST00000509354 PTK7Q13308 1070 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 CEP55Q53EZ4 464 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 RESP18Q5W5W9 173 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 RUFY4Q6ZNE9 571 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 TMCO2Q7Z6W1 182 aaPredicted RBP8.18□□□□□ -1.1
TRIO-213ENST00000509354 PLA2G4DQ86XP0 818 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 RPUSD2Q8IZ73 545 aaKnown RBP8.18□□□□□ -1.1
TRIO-213ENST00000509354 BLIDQ8IZY5 108 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 C4orf32Q8N8J7 132 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 GIMAP8Q8ND71 665 aaPredicted RBP8.18□□□□□ -1.1
TRIO-213ENST00000509354 CCDC148Q8NFR7 591 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 CCDC12Q8WUD4 166 aaPredicted RBP8.18□□□□□ -1.1
TRIO-213ENST00000509354 TRAPPC12Q8WVT3 735 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 ATP6V0A1Q93050 837 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 TIFAQ96CG3 184 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 CDHR1Q96JP9 859 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 CDX2Q99626 313 aaPredicted RBP8.18□□□□□ -1.1
TRIO-213ENST00000509354 SEMA6BQ9H3T3 888 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 RNPEPQ9H4A4 650 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 C6orf50Q9HD87 102 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 JPH1Q9HDC5 661 aaPredicted RBP8.18□□□□□ -1.1
TRIO-213ENST00000509354 PLSCR2Q9NRY7 297 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 ZNF215Q9UL58 517 aaPredicted RBP8.18□□□□□ -1.1
TRIO-213ENST00000509354 SRPRBQ9Y5M8 271 aaKnown RBP8.18□□□□□ -1.1
TRIO-213ENST00000509354 SLC4A7Q9Y6M7 1214 aa8.18□□□□□ -1.1
TRIO-213ENST00000509354 CUTAO60888 179 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 LGR5O75473 907 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 CCNE2O96020 404 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 PFKMP08237 780 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 ATP2A2P16615 1042 aaKnown RBP8.17□□□□□ -1.1
TRIO-213ENST00000509354 RFC2P35250 354 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 ZNF76P36508 570 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 THPOP40225 353 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 RPIAP49247 311 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 NLRP5P59047 1200 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 ACTR2P61160 394 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 IGBP1P78318 339 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 ADAM17P78536 824 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 DEFB103AP81534 67 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 ATP2C1P98194 919 aaPredicted RBP8.17□□□□□ -1.1
TRIO-213ENST00000509354 PPFIA1Q13136 1202 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 GRIN2CQ14957 1233 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 L1TD1Q5T7N2 865 aaKnown RBP8.17□□□□□ -1.1
TRIO-213ENST00000509354 SHC4Q6S5L8 630 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 SPRED2Q7Z698 418 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 MRPS27Q92552 414 aaKnown RBP8.17□□□□□ -1.1
TRIO-213ENST00000509354 GLG1Q92896 1179 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 LENG9Q96B70 501 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 SDF4Q9BRK5 362 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 GZF1Q9H116 711 aaPredicted RBP8.17□□□□□ -1.1
TRIO-213ENST00000509354 GLT8D2Q9H1C3 349 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 MTIF3Q9H2K0 278 aaKnown RBP8.17□□□□□ -1.1
TRIO-213ENST00000509354 GRPEL1Q9HAV7 217 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 BRMS1Q9HCU9 246 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 DACT1Q9NYF0 836 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 SLC9A2Q9UBY0 812 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 STXBP5LQ9Y2K9 1186 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 GPSM3Q9Y4H4 160 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 NFASCO94856 1347 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 EMSYQ7Z589 1322 aa8.17□□□□□ -1.1
TRIO-213ENST00000509354 COL4A6Q14031 1691 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms