RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 CTAGE4Q8IX94 777 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 DAW1Q8N136 415 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 UBE2Q2Q8WVN8 375 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 UPF1Q92900 1129 aaKnown RBP eCLIP10.11□□□□□ -0.79
HTT-205ENST00000509043 CALR3Q96L12 384 aaKnown RBP10.11□□□□□ -0.79
HTT-205ENST00000509043 NTPCRQ9BSD7 190 aaKnown RBP10.11□□□□□ -0.79
HTT-205ENST00000509043 IRX2Q9BZI1 471 aaPredicted RBP10.11□□□□□ -0.79
HTT-205ENST00000509043 JPH1Q9HDC5 661 aaPredicted RBP10.11□□□□□ -0.79
HTT-205ENST00000509043 SCAF8Q9UPN6 1271 aaKnown RBP10.11□□□□□ -0.79
HTT-205ENST00000509043 SAR1BQ9Y6B6 198 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 SNCAIPQ9Y6H5 919 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 RLFQ13129 1914 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 SMCHD1A6NHR9 2005 aa10.11□□□□□ -0.79
HTT-205ENST00000509043 NKRFO15226 690 aaKnown RBP eCLIP10.1□□□□□ -0.79
HTT-205ENST00000509043 DGAT1O75907 488 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 KCNA2P16389 499 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 TCP1P17987 556 aaKnown RBP10.1□□□□□ -0.79
HTT-205ENST00000509043 PON1P27169 355 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 ITIH3Q06033 890 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 BFSP1Q12934 665 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 DMP1Q13316 513 aaPredicted RBP10.1□□□□□ -0.79
HTT-205ENST00000509043 RAPGEF1Q13905 1077 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 VGLL4Q14135 290 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 BRD3Q15059 726 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 TDRD12Q587J7 1177 aaKnown RBP10.1□□□□□ -0.79
HTT-205ENST00000509043 DCAF17Q5H9S7 520 aaPredicted RBP10.1□□□□□ -0.79
HTT-205ENST00000509043 TCERG1LQ5VWI1 586 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 SMYD5Q6GMV2 418 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 MIS18BP1Q6P0N0 1132 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.1□□□□□ -0.79
HTT-205ENST00000509043 USP50Q70EL3 339 aaPredicted RBP10.1□□□□□ -0.79
HTT-205ENST00000509043 ERO1BQ86YB8 467 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 RIOX2Q8IUF8 465 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 GTF3C2Q8WUA4 911 aaPredicted RBP10.1□□□□□ -0.79
HTT-205ENST00000509043 RUBCNQ92622 972 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 NOX5Q96PH1 765 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 NLRC4Q9NPP4 1024 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 A1CFQ9NQ94 594 aaKnown RBP10.1□□□□□ -0.79
HTT-205ENST00000509043 OGFRQ9NZT2 677 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 RNF14Q9UBS8 474 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 SLC9A2Q9UBY0 812 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 INTUQ9ULD6 942 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 USP20Q9Y2K6 914 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 RIPK3Q9Y572 518 aa10.1□□□□□ -0.79
HTT-205ENST00000509043 A0A0G2JLL6 359 aaPredicted RBP10.09□□□□□ -0.79
HTT-205ENST00000509043 CCDC151A5D8V7 595 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 SFI1A8K8P3 1242 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 IRF6O14896 467 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 ZNF263O14978 683 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 ZBTB39O15060 712 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 KIAA0391O15091 583 aaKnown RBP10.09□□□□□ -0.79
HTT-205ENST00000509043 EXOC3O60645 756 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 ATP9AO75110 1047 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 SLC25A27O95847 323 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 CCNE2O96020 404 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 TGFB3P10600 412 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 STAT1P42224 750 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 FMO5P49326 533 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 JAM2P57087 298 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 DGKZQ13574 1117 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 BMS1Q14692 1282 aaKnown RBP10.09□□□□□ -0.79
HTT-205ENST00000509043 ZC2HC1CQ53FD0 456 aaPredicted RBP10.09□□□□□ -0.79
HTT-205ENST00000509043 XKR9Q5GH70 373 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 XKR3Q5GH77 459 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 DPY19L2P1Q6NXN4 242 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 FBXO38Q6PIJ6 1188 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 KCNV1Q6PIU1 500 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 TMCO3Q6UWJ1 677 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 HAUS6Q7Z4H7 955 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 PRRT2Q7Z6L0 340 aaPredicted RBP10.09□□□□□ -0.79
HTT-205ENST00000509043 ANKRD13AQ8IZ07 590 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 XXYLT1Q8NBI6 393 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 MSANTD4Q8NCY6 345 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 HNRNPLLQ8WVV9 542 aaKnown RBP10.09□□□□□ -0.79
HTT-205ENST00000509043 L3MBTL3Q96JM7 780 aaPredicted RBP10.09□□□□□ -0.79
HTT-205ENST00000509043 FAM81BQ96LP2 452 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 STK33Q9BYT3 514 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 LACRTQ9GZZ8 138 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 PKD2L1Q9P0L9 805 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 GCNT4Q9P109 453 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 A0A0G2JMZ2 1700 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 PAPPA2Q9BXP8 1791 aa10.09□□□□□ -0.79
HTT-205ENST00000509043 A0A0U1RQJ8 604 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 SPDYE5A6NIY4 337 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 BACH1O14867 736 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 CLIC2O15247 247 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 TLR2O60603 784 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 ERLIN1O75477 346 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 ATG7O95352 703 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 PLEKP08567 350 aaPredicted RBP10.08□□□□□ -0.8
HTT-205ENST00000509043 SLC9A1P19634 815 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 GTF2H1P32780 548 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 CASP4P49662 377 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 MYL7Q01449 175 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 CYP27A1Q02318 531 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 KCNA1Q09470 495 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 NAA30Q147X3 362 aaPredicted RBP10.08□□□□□ -0.8
HTT-205ENST00000509043 TEX35Q5T0J7 233 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 CCDC70Q6NSX1 233 aa10.08□□□□□ -0.8
HTT-205ENST00000509043 DPY19L2Q6NUT2 758 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms