RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 TLL1O43897 1013 aa20.31■□□□□ 0.84
CLDND1-220ENST00000508902 AMHP03971 560 aa20.31■□□□□ 0.84
CLDND1-220ENST00000508902 DARSP14868 501 aaKnown RBP20.31■□□□□ 0.84
CLDND1-220ENST00000508902 CDC25AP30304 524 aa20.31■□□□□ 0.84
CLDND1-220ENST00000508902 PAK2Q13177 524 aa20.31■□□□□ 0.84
CLDND1-220ENST00000508902 EMC2Q15006 297 aa20.31■□□□□ 0.84
CLDND1-220ENST00000508902 XKR9Q5GH70 373 aa20.31■□□□□ 0.84
CLDND1-220ENST00000508902 PPP2R2DQ66LE6 453 aa20.31■□□□□ 0.84
CLDND1-220ENST00000508902 USP38Q8NB14 1042 aa20.31■□□□□ 0.84
CLDND1-220ENST00000508902 SP7Q8TDD2 431 aaPredicted RBP20.31■□□□□ 0.84
CLDND1-220ENST00000508902 MAP7D2Q96T17 732 aa20.31■□□□□ 0.84
CLDND1-220ENST00000508902 TSPYL2Q9H2G4 693 aaPredicted RBP20.31■□□□□ 0.84
CLDND1-220ENST00000508902 PRDM12Q9H4Q4 367 aa20.31■□□□□ 0.84
CLDND1-220ENST00000508902 CERS4Q9HA82 394 aa20.31■□□□□ 0.84
CLDND1-220ENST00000508902 SUCLA2Q9P2R7 463 aaPredicted RBP20.31■□□□□ 0.84
CLDND1-220ENST00000508902 PRRC2BQ5JSZ5 2229 aaKnown RBP20.3■□□□□ 0.84
CLDND1-220ENST00000508902 A0A087WZ62 844 aa20.3■□□□□ 0.84
CLDND1-220ENST00000508902 LINC01553A4QN01 128 aa20.3■□□□□ 0.84
CLDND1-220ENST00000508902 RPS6KA5O75582 802 aa20.3■□□□□ 0.84
CLDND1-220ENST00000508902 GRIN1Q05586 938 aa20.3■□□□□ 0.84
CLDND1-220ENST00000508902 FDXACB1Q9BRP7 624 aaPredicted RBP20.3■□□□□ 0.84
CLDND1-220ENST00000508902 TUFT1Q9NNX1 390 aa20.3■□□□□ 0.84
CLDND1-220ENST00000508902 ANKEF1Q9NU02 776 aa20.3■□□□□ 0.84
CLDND1-220ENST00000508902 RFXAPO00287 272 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 DKC1O60832 514 aaKnown RBP eCLIP20.29■□□□□ 0.84
CLDND1-220ENST00000508902 UPP2O95045 317 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 RPA1P27694 616 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 TMOD1P28289 359 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 PRPHP41219 470 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 GATMP50440 423 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 NFX1Q12986 1120 aaKnown RBP20.29■□□□□ 0.84
CLDND1-220ENST00000508902 KCNK18Q7Z418 384 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 ASAP3Q8TDY4 903 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 LRRC15Q8TF66 581 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 RAD9AQ99638 391 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 MINDY3Q9H8M7 445 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 SLC28A3Q9HAS3 691 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 IFT122Q9HBG6 1241 aa20.29■□□□□ 0.84
CLDND1-220ENST00000508902 RALGAPA2Q2PPJ7 1873 aa20.28■□□□□ 0.84
CLDND1-220ENST00000508902 EIF4BP23588 611 aaKnown RBP20.28■□□□□ 0.84
CLDND1-220ENST00000508902 RFC5P40937 340 aa20.28■□□□□ 0.84
CLDND1-220ENST00000508902 POLGP54098 1239 aaPredicted RBP20.28■□□□□ 0.84
CLDND1-220ENST00000508902 RHPN2Q8IUC4 686 aa20.28■□□□□ 0.84
CLDND1-220ENST00000508902 PRPF31Q8WWY3 499 aaKnown RBP20.28■□□□□ 0.84
CLDND1-220ENST00000508902 STXBP5LQ9Y2K9 1186 aa20.28■□□□□ 0.84
CLDND1-220ENST00000508902 PPME1Q9Y570 386 aa20.28■□□□□ 0.84
CLDND1-220ENST00000508902 C9IYK1 514 aa20.27■□□□□ 0.84
CLDND1-220ENST00000508902 BRAPQ7Z569 592 aa20.27■□□□□ 0.84
CLDND1-220ENST00000508902 NLRP7Q8WX94 980 aa20.27■□□□□ 0.84
CLDND1-220ENST00000508902 ZNF689Q96CS4 500 aaPredicted RBP20.27■□□□□ 0.84
CLDND1-220ENST00000508902 NLRP4Q96MN2 994 aa20.27■□□□□ 0.84
CLDND1-220ENST00000508902 GPRC5CQ9NQ84 441 aa20.27■□□□□ 0.84
CLDND1-220ENST00000508902 RNF19AQ9NV58 838 aa20.27■□□□□ 0.84
CLDND1-220ENST00000508902 LRWD1Q9UFC0 647 aa20.27■□□□□ 0.84
CLDND1-220ENST00000508902 COL4A3BPQ9Y5P4 624 aa20.27■□□□□ 0.84
CLDND1-220ENST00000508902 LAD1O00515 517 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 LPXNO60711 386 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 USO1O60763 962 aaKnown RBP20.26■□□□□ 0.83
CLDND1-220ENST00000508902 CCT6AP40227 531 aaKnown RBP20.26■□□□□ 0.83
CLDND1-220ENST00000508902 LAMTOR4Q0VGL1 99 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 PDIA5Q14554 519 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 PTPAQ15257 358 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 OTUD6AQ7L8S5 288 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 HSCBQ8IWL3 235 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 SNX29Q8TEQ0 813 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 SLC7A3Q8WY07 619 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 PNMA5Q96PV4 448 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 MTRQ99707 1265 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 ADAM2Q99965 735 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 C17orf80Q9BSJ5 609 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 ZBED2Q9BTP6 218 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 FTHL17Q9BXU8 183 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 RGS18Q9NS28 235 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 DBR1Q9UK59 544 aaKnown RBP20.26■□□□□ 0.83
CLDND1-220ENST00000508902 CLIC4Q9Y696 253 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 MYO7AQ13402 2215 aa20.26■□□□□ 0.83
CLDND1-220ENST00000508902 PDCP20941 246 aa20.25■□□□□ 0.83
CLDND1-220ENST00000508902 GLRA2P23416 452 aa20.25■□□□□ 0.83
CLDND1-220ENST00000508902 ARL2P36404 184 aa20.25■□□□□ 0.83
CLDND1-220ENST00000508902 PKP1Q13835 747 aa20.25■□□□□ 0.83
CLDND1-220ENST00000508902 CAPSQ13938 189 aa20.25■□□□□ 0.83
CLDND1-220ENST00000508902 SF3A1Q15459 793 aaKnown RBP20.25■□□□□ 0.83
CLDND1-220ENST00000508902 ZNF410Q86VK4 478 aa20.25■□□□□ 0.83
CLDND1-220ENST00000508902 HCSTQ9UBK5 93 aa20.25■□□□□ 0.83
CLDND1-220ENST00000508902 INSL6Q9Y581 213 aa20.25■□□□□ 0.83
CLDND1-220ENST00000508902 VWA3AA6NCI4 1184 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 GPR182O15218 404 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 STX6O43752 255 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 DGKIO75912 1065 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 XRCC6P12956 609 aaKnown RBP eCLIP20.24■□□□□ 0.83
CLDND1-220ENST00000508902 ATF7P17544 494 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-220ENST00000508902 ERVK-21P61565 698 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 DTHD1Q6ZMT9 781 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 NPAS4Q8IUM7 802 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 PSPC1Q8WXF1 523 aaKnown RBP20.24■□□□□ 0.83
CLDND1-220ENST00000508902 ARNTL2Q8WYA1 636 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 BSNDQ8WZ55 320 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 JPH2Q9BR39 696 aaPredicted RBP20.24■□□□□ 0.83
CLDND1-220ENST00000508902 ATP6V0A4Q9HBG4 840 aa20.24■□□□□ 0.83
CLDND1-220ENST00000508902 POLD4Q9HCU8 107 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms