RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PGM1P36871 562 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 ASPHQ12797 758 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CRELD2Q6UXH1 353 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 ANKRD44Q8N8A2 993 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 GIMAP8Q8ND71 665 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PANK1Q8TE04 598 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 RAPGEF4Q8WZA2 1011 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 RAPGEF5Q92565 580 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 C3orf49Q96BT1 292 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 FAM81BQ96LP2 452 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PURBQ96QR8 312 aaKnown RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 UHRF1Q96T88 793 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 RMDN3Q96TC7 470 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 ELAC1Q9H777 363 aaKnown RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 ZNF358Q9NW07 568 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 HYPKQ9NX55 129 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 TMEM63CQ9P1W3 806 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 KIAA1551Q9HCM1 1747 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PRAMEF27A3QJZ7 478 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CTAGE15A4D2H0 777 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 POLR3GO15318 223 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PPM1BO75688 479 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 RASSF9O75901 435 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CTAGE8P0CG41 777 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 SFPQP23246 707 aaKnown RBP eCLIP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 GJA5P36382 358 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 PDE4BQ07343 736 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 SQSTM1Q13501 440 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CLEC16AQ2KHT3 1053 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 FAM209AQ5JX71 171 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 OTUD6AQ7L8S5 288 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CTAGE6Q86UF2 777 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 CTAGE4Q8IX94 777 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 EXOC4Q96A65 974 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 SIKE1Q9BRV8 207 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 SYNDIG1Q9H7V2 258 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 TBC1D23Q9NUY8 699 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 C14orf119Q9NWQ9 140 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 EIF2B4Q9UI10 523 aaKnown RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 MTF2Q9Y483 593 aaPredicted RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 SPEF1Q9Y4P9 236 aa4.26□□□□□ -1.73
NEDD4-209ENST00000508871 LRRFIP2Q9Y608 721 aaKnown RBP4.26□□□□□ -1.73
NEDD4-209ENST00000508871 A0A1W2PQ27 194 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 A0A1W2PQ64 194 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 A0A1W2PQC6 194 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 A0A1W2PQD8 194 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 MEIS1O00470 390 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ECEL1O95672 775 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 LTFP02788 710 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 GNAI3P08754 354 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 CAPZA2P47755 286 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 POLD2P49005 469 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 AP2B1P63010 937 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 MCL1Q07820 350 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 MPP3Q13368 585 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 SEMA3AQ14563 771 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 PLCL1Q15111 1095 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 C11orf91Q3C1V1 193 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 DCAF17Q5H9S7 520 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 TIGD7Q6NT04 549 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ZNF530Q6P9A1 599 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 CYP2U1Q7Z449 544 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 PEX5LQ8IYB4 626 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 IL17REQ8NFR9 667 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 FRAT1Q92837 279 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ALKBH8Q96BT7 664 aaKnown RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 CDADC1Q9BWV3 514 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 CARD6Q9BX69 1037 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 CDH19Q9H159 772 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 BRMS1Q9HCU9 246 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 TBC1D22BQ9NU19 505 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 CPSF3Q9UKF6 684 aaKnown RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 MAPRE3Q9UPY8 281 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 BTBD11A6QL63 1104 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 DAPK3O43293 454 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 PRPF3O43395 683 aaKnown RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 TXNL1O43396 289 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 BUB1BO60566 1050 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 FBXO21O94952 628 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 FBLN1P23142 703 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 SPARCL1Q14515 664 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 CARTPTQ16568 116 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 TUSC1Q2TAM9 212 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 SPATA21Q7Z572 469 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 RSPH3Q86UC2 560 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 NAT16Q8N8M0 369 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 BICD2Q8TD16 824 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 RETREG1Q9H6L5 497 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ELP3Q9H9T3 547 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 NGRNQ9NPE2 291 aaKnown RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 BAG5Q9UL15 447 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 AURKCQ9UQB9 309 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ERICH2A1L162 156 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 M0R2C6 588 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 TSPAN4O14817 238 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ERLIN1O75477 346 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ATF7P17544 494 aaPredicted RBP4.25□□□□□ -1.73
NEDD4-209ENST00000508871 SDSP20132 328 aa4.25□□□□□ -1.73
NEDD4-209ENST00000508871 ATP5DP30049 168 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms