RNA–Protein interactions for RNA: ENST00000508715.5

PTPN20-220, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-220ENST00000508715 ARHGEF35A5YM69 484 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 MYMKA6NI61 221 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 RSPH10B2B2RC85 870 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 POLR2DO15514 142 aaKnown RBP11.5□□□□□ -0.57
PTPN20-220ENST00000508715 ACTN4O43707 911 aaKnown RBP11.5□□□□□ -0.57
PTPN20-220ENST00000508715 RSPH10BP0C881 870 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 CSF2RAP15509 400 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 SELPP16109 830 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 GLRA2P23416 452 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 RFC5P40937 340 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 GPC3P51654 580 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 POLGP54098 1239 aaPredicted RBP11.5□□□□□ -0.57
PTPN20-220ENST00000508715 MRPS6P82932 125 aaKnown RBP11.5□□□□□ -0.57
PTPN20-220ENST00000508715 DHX8Q14562 1220 aaKnown RBP11.5□□□□□ -0.57
PTPN20-220ENST00000508715 TPRNQ4KMQ1 711 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 RRAGBQ5VZM2 374 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 MFSD5Q6N075 450 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 LRRC8DQ7L1W4 858 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 MAEAQ7L5Y9 396 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 PRPF31Q8WWY3 499 aaKnown RBP11.5□□□□□ -0.57
PTPN20-220ENST00000508715 LARP4BQ92615 738 aaKnown RBP11.5□□□□□ -0.57
PTPN20-220ENST00000508715 STAMQ92783 540 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 DNAJC19Q96DA6 116 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 CDK5RAP3Q96JB5 506 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 AGO3Q9H9G7 860 aaKnown RBP11.5□□□□□ -0.57
PTPN20-220ENST00000508715 ATP6V0A4Q9HBG4 840 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 SUCLA2Q9P2R7 463 aaPredicted RBP11.5□□□□□ -0.57
PTPN20-220ENST00000508715 KCNH3Q9ULD8 1083 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 CDY2AQ9Y6F7 541 aa11.5□□□□□ -0.57
PTPN20-220ENST00000508715 GBF1Q92538 1859 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 CAND2O75155 1236 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 CXCL10P02778 98 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 SSBP05455 408 aaKnown RBP eCLIP11.49□□□□□ -0.57
PTPN20-220ENST00000508715 RAG1P15918 1043 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 LIG1P18858 919 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 CASP1P29466 404 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 NLRP11P59045 1033 aaKnown RBP11.49□□□□□ -0.57
PTPN20-220ENST00000508715 MDM2Q00987 491 aaPredicted RBP11.49□□□□□ -0.57
PTPN20-220ENST00000508715 RAD51AP2Q09MP3 1159 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 BFSP2Q13515 415 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 SNW1Q13573 536 aaKnown RBP11.49□□□□□ -0.57
PTPN20-220ENST00000508715 LPIN1Q14693 890 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 KIZQ2M2Z5 673 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 LONRF3Q496Y0 759 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 FBXO47Q5MNV8 452 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 IER5Q5VY09 327 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 CCDC73Q6ZRK6 1079 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 NME8Q8N427 588 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 FSIP1Q8NA03 581 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 SLC7A3Q8WY07 619 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 DHX58Q96C10 678 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 CELF4Q9BZC1 486 aaKnown RBP11.49□□□□□ -0.57
PTPN20-220ENST00000508715 POLR3FQ9H1D9 316 aaPredicted RBP11.49□□□□□ -0.57
PTPN20-220ENST00000508715 MINDY3Q9H8M7 445 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 IFT122Q9HBG6 1241 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 KBTBD4Q9NVX7 518 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 STK17AQ9UEE5 414 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 CCDC39Q9UFE4 941 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 SERTAD1Q9UHV2 236 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 ADGRA3Q8IWK6 1321 aa11.49□□□□□ -0.57
PTPN20-220ENST00000508715 A0A087WZ62 844 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 SFI1A8K8P3 1242 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 HIP1RO75146 1068 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 CSDE1O75534 798 aaKnown RBP11.48□□□□□ -0.57
PTPN20-220ENST00000508715 EDN1P05305 212 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 ACRP10323 421 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 GUCY2CP25092 1073 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 TXLNAP40222 546 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 STAT6P42226 847 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 MAGEA10P43363 369 aaPredicted RBP11.48□□□□□ -0.57
PTPN20-220ENST00000508715 LAMTOR4Q0VGL1 99 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 CAPSQ13938 189 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 GIT2Q14161 759 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 GPBP1Q86WP2 473 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 RHPN2Q8IUC4 686 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 GRAMD1CQ8IYS0 662 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 FMR1NBQ8N0W7 255 aaPredicted RBP11.48□□□□□ -0.57
PTPN20-220ENST00000508715 RETREG2Q8NC44 543 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 MRPS27Q92552 414 aaKnown RBP11.48□□□□□ -0.57
PTPN20-220ENST00000508715 FIZ1Q96SL8 496 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 OSMRQ99650 979 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 GDF15Q99988 308 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 REEP2Q9BRK0 252 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 FDXACB1Q9BRP7 624 aaPredicted RBP11.48□□□□□ -0.57
PTPN20-220ENST00000508715 PRO3102Q9H379 93 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 LMBRD1Q9NUN5 540 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 AKT3Q9Y243 479 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 NOC2LQ9Y3T9 749 aaKnown RBP11.48□□□□□ -0.57
PTPN20-220ENST00000508715 COL4A3BPQ9Y5P4 624 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 TRPV2Q9Y5S1 764 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 NR2E3Q9Y5X4 410 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 MYO9BQ13459 2157 aa11.48□□□□□ -0.57
PTPN20-220ENST00000508715 GAS2O43903 313 aaKnown RBP11.47□□□□□ -0.57
PTPN20-220ENST00000508715 PRPF40AO75400 957 aaKnown RBP11.47□□□□□ -0.57
PTPN20-220ENST00000508715 ZNF202O95125 648 aa11.47□□□□□ -0.57
PTPN20-220ENST00000508715 GHRP10912 638 aa11.47□□□□□ -0.57
PTPN20-220ENST00000508715 FGFR4P22455 802 aa11.47□□□□□ -0.57
PTPN20-220ENST00000508715 TMOD1P28289 359 aa11.47□□□□□ -0.57
PTPN20-220ENST00000508715 ZNF131P52739 623 aa11.47□□□□□ -0.57
PTPN20-220ENST00000508715 FAM102BQ5T8I3 360 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms