RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 TTLL1O95922 423 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 GH2P01242 217 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 ATF4P18848 351 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 GTF2A2P52657 109 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 NOGQ13253 232 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 PRKG1Q13976 671 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 MPP2Q14168 576 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 SLC4A8Q2Y0W8 1093 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 DLK2Q6UY11 383 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 TBC1D10CQ8IV04 446 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 HID1Q8IV36 788 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 PLD6Q8N2A8 252 aaKnown RBP6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 FBXL16Q8N461 479 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 SLC44A5Q8NCS7 719 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 UBXN4Q92575 508 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 ANKS1AQ92625 1134 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 ZKSCAN4Q969J2 545 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 MKL1Q969V6 931 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 SEC16BQ96JE7 1060 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 TMEM87BQ96K49 555 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 NEK1Q96PY6 1258 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 UBAC1Q9BSL1 405 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 FOXQ1Q9C009 403 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 BRMS1Q9HCU9 246 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 TOMM22Q9NS69 142 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 PCMTD2Q9NV79 361 aa6.41□□□□□ -1.38
HMGB1P44-201ENST00000508597 MYH4Q9Y623 1939 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 MANSC4A6NHS7 340 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 PRR33A8MZF0 331 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 CHURC1-FNTBB4DL54 471 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 B4E1Z4 1266 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 MPHOSPH10O00566 681 aaKnown RBP6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 PRDM1O75626 825 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 LRIG2O94898 1065 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 CST3P01034 146 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 AKR1B1P15121 316 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 GUCY1A2P33402 732 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 MAP2K2P36507 400 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 LIFRP42702 1097 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 SOX9P48436 509 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 OXCT1P55809 520 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 BACE1P56817 501 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 ICA1Q05084 483 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 APOBRQ0VD83 1088 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 SNAPC2Q13487 334 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 SEPT2Q15019 361 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 RAB3GAP1Q15042 981 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 RRP12Q5JTH9 1297 aaKnown RBP6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 OTUD7BQ6GQQ9 843 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 RCSD1Q6JBY9 416 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 BLOC1S2Q6QNY1 142 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 FASTKD5Q7L8L6 764 aaKnown RBP6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 REC114Q7Z4M0 266 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 WFDC3Q8IUB2 231 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 SLITRK4Q8IW52 837 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 MB21D2Q8IYB1 491 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 LPAR1Q92633 364 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 OPTNQ96CV9 577 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 WNK4Q96J92 1243 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 KRTAP9-2Q9BYQ4 174 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 C22orf23Q9BZE7 217 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 TANGO6Q9C0B7 1094 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 KIAA1683Q9H0B3 1180 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 ZCCHC17Q9NP64 241 aaKnown RBP6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 MTMR4Q9NYA4 1195 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 ZSWIM5Q9P217 1185 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 TMX2Q9Y320 296 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 AFG3L2Q9Y4W6 797 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 SNX14Q9Y5W7 946 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 ZHX2Q9Y6X8 837 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 PHIPQ8WWQ0 1821 aa6.4□□□□□ -1.38
HMGB1P44-201ENST00000508597 PTPRFP10586 1907 aa6.4□□□□□ -1.39
HMGB1P44-201ENST00000508597 TOP1P11387 765 aaKnown RBP6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 CETPP11597 493 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 PLCG1P19174 1290 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 DNAJA1P31689 397 aaKnown RBP6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 CD96P40200 585 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 RCAN1P53805 252 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 EXOSC10Q01780 885 aaKnown RBP6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 SREBF2Q12772 1141 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 BNIP3Q12983 259 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 SPP2Q13103 211 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 PABPC4Q13310 644 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 RRP1BQ14684 758 aaKnown RBP6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 WTAPQ15007 396 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 ANKRD1Q15327 319 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 CYP27C1Q4G0S4 372 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 FAM47AQ5JRC9 791 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 STOX1Q6ZVD7 989 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 MOB2Q70IA6 237 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 RUFY3Q7L099 469 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 CDH24Q86UP0 819 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 MCF2L2Q86YR7 1114 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 RASAL3Q86YV0 1011 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 MCATQ8IVS2 390 aaKnown RBP6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 MRPL41Q8IXM3 137 aaKnown RBP6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 GMCL1P1Q8NEA9 526 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 GIMAP7Q8NHV1 300 aa6.39□□□□□ -1.39
HMGB1P44-201ENST00000508597 CEP95Q96GE4 821 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms