RNA–Protein interactions for RNA: ENST00000508503.5

CLDND1-218, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 707 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-218ENST00000508503 TRIM29Q14134 588 aa13.61□□□□□ -0.23
CLDND1-218ENST00000508503 PTPROQ16827 1216 aa13.61□□□□□ -0.23
CLDND1-218ENST00000508503 MTERF2Q49AM1 385 aa13.61□□□□□ -0.23
CLDND1-218ENST00000508503 CCDC83Q8IWF9 413 aa13.61□□□□□ -0.23
CLDND1-218ENST00000508503 EXOC8Q8IYI6 725 aa13.61□□□□□ -0.23
CLDND1-218ENST00000508503 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
CLDND1-218ENST00000508503 FBXO18Q8NFZ0 1043 aa13.61□□□□□ -0.23
CLDND1-218ENST00000508503 HLA-CQ95604 372 aa13.61□□□□□ -0.23
CLDND1-218ENST00000508503 JPH2Q9BR39 696 aaPredicted RBP13.61□□□□□ -0.23
CLDND1-218ENST00000508503 C11orf84Q9BUA3 381 aaPredicted RBP13.61□□□□□ -0.23
CLDND1-218ENST00000508503 DHX33Q9H6R0 707 aaKnown RBP13.61□□□□□ -0.23
CLDND1-218ENST00000508503 CYP26B1Q9NR63 512 aa13.61□□□□□ -0.23
CLDND1-218ENST00000508503 TMEM161AQ9NX61 479 aa13.61□□□□□ -0.23
CLDND1-218ENST00000508503 RGL1Q9NZL6 768 aa13.61□□□□□ -0.23
CLDND1-218ENST00000508503 SEPT9Q9UHD8 586 aaPredicted RBP13.61□□□□□ -0.23
CLDND1-218ENST00000508503 PCDHA12Q9UN75 941 aa13.61□□□□□ -0.23
CLDND1-218ENST00000508503 PCDHB7Q9Y5E2 793 aa13.61□□□□□ -0.23
CLDND1-218ENST00000508503 MRPL42Q9Y6G3 142 aaKnown RBP13.61□□□□□ -0.23
CLDND1-218ENST00000508503 FNDC1Q4ZHG4 1894 aaPredicted RBP13.61□□□□□ -0.23
CLDND1-218ENST00000508503 DENND3A2RUS2 1198 aa13.6□□□□□ -0.23
CLDND1-218ENST00000508503 LYPLA2O95372 231 aa13.6□□□□□ -0.23
CLDND1-218ENST00000508503 NPEPPSP55786 919 aa13.6□□□□□ -0.23
CLDND1-218ENST00000508503 HMGN5P82970 282 aaKnown RBP13.6□□□□□ -0.23
CLDND1-218ENST00000508503 CAMK1Q14012 370 aa13.6□□□□□ -0.23
CLDND1-218ENST00000508503 ZNF410Q86VK4 478 aa13.6□□□□□ -0.23
CLDND1-218ENST00000508503 PPP1R16BQ96T49 567 aa13.6□□□□□ -0.23
CLDND1-218ENST00000508503 SH2D3AQ9BRG2 576 aa13.6□□□□□ -0.23
CLDND1-218ENST00000508503 TRAIPQ9BWF2 469 aa13.6□□□□□ -0.23
CLDND1-218ENST00000508503 ZSWIM4Q9H7M6 989 aa13.6□□□□□ -0.23
CLDND1-218ENST00000508503 SUCLA2Q9P2R7 463 aaPredicted RBP13.6□□□□□ -0.23
CLDND1-218ENST00000508503 PLAGL2Q9UPG8 496 aa13.6□□□□□ -0.23
CLDND1-218ENST00000508503 A0A0U1RQF3 1178 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 ZBTB39O15060 712 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 GRM6O15303 877 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 MARCH6O60337 910 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 CTNNB1P35222 781 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 SKIV2LQ15477 1246 aaKnown RBP13.59□□□□□ -0.23
CLDND1-218ENST00000508503 CALCRLQ16602 461 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 FAM102BQ5T8I3 360 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 OTUD6AQ7L8S5 288 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 ZNF598Q86UK7 904 aaKnown RBP13.59□□□□□ -0.23
CLDND1-218ENST00000508503 SPPL3Q8TCT6 385 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 DYDC2Q96IM9 177 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 LXNQ9BS40 222 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 FOXP1Q9H334 677 aaPredicted RBP13.59□□□□□ -0.23
CLDND1-218ENST00000508503 TTC12Q9H892 705 aaPredicted RBP13.59□□□□□ -0.23
CLDND1-218ENST00000508503 IFT122Q9HBG6 1241 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 CHST12Q9NRB3 414 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 RNF19AQ9NV58 838 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 LRFN2Q9ULH4 789 aa13.59□□□□□ -0.23
CLDND1-218ENST00000508503 A0A087WZ62 844 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 NEMFO60524 1076 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 EOMESO95936 686 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 XRCC6P12956 609 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 ZSCAN20P17040 1043 aaPredicted RBP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 YWHABP31946 246 aaKnown RBP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 RFC5P40937 340 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 GATMP50440 423 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 ORC2Q13416 577 aaPredicted RBP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 RABEP1Q15276 862 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 SAFBQ15424 915 aaKnown RBP eCLIP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 CTC1Q2NKJ3 1217 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 TIGD5Q53EQ6 642 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 PLA2G4FQ68DD2 849 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 NCAPH2Q6IBW4 605 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 ECHDC2Q86YB7 292 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 C8orf76Q96K31 380 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 ZNF668Q96K58 619 aaPredicted RBP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 CEP170P1Q96L14 293 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 EIF2AK1Q9BQI3 630 aaKnown RBP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 FDXACB1Q9BRP7 624 aaPredicted RBP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 GCOM2Q9BZD3 368 aaPredicted RBP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 INO80BQ9C086 356 aaPredicted RBP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 TMEM60Q9H2L4 133 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 NSUN3Q9H649 340 aaKnown RBP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 UBE2ZQ9H832 354 aaPredicted RBP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 ATP6V0A4Q9HBG4 840 aa13.58□□□□□ -0.24
CLDND1-218ENST00000508503 TCF20Q9UGU0 1960 aaKnown RBP13.58□□□□□ -0.24
CLDND1-218ENST00000508503 ASAP2O43150 1006 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 GAS2O43903 313 aaKnown RBP13.57□□□□□ -0.24
CLDND1-218ENST00000508503 ZNF623O75123 536 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 ITGB1P05556 798 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 U2AF2P26368 475 aaKnown RBP eCLIP13.57□□□□□ -0.241e-8■■□□□ 13.8
CLDND1-218ENST00000508503 TXKP42681 527 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 KCNQ1P51787 676 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 GUCY1B3Q02153 619 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 CTTNQ14247 550 aaKnown RBP13.57□□□□□ -0.24
CLDND1-218ENST00000508503 LEXMQ3ZCV2 418 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 KSR1Q8IVT5 923 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 KLHL23Q8NBE8 558 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 NEK9Q8TD19 979 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 ADAMTS19Q8TE59 1207 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 PRPF31Q8WWY3 499 aaKnown RBP13.57□□□□□ -0.24
CLDND1-218ENST00000508503 NLRP7Q8WX94 980 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 SLC7A3Q8WY07 619 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 CASD1Q96PB1 797 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 TMEM117Q9H0C3 514 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 CWH43Q9H720 699 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 ANKEF1Q9NU02 776 aa13.57□□□□□ -0.24
CLDND1-218ENST00000508503 TYW1Q9NV66 732 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms