RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 NPY5RQ15761 445 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 MTERF2Q49AM1 385 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 XKR3Q5GH77 459 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 NEK8Q86SG6 692 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 KLHL23Q8NBE8 558 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 FBXO18Q8NFZ0 1043 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 PPP2R3CQ969Q6 453 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 C8orf76Q96K31 380 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 MBOAT7Q96N66 472 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 NAP1L4Q99733 375 aaKnown RBP13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 NIFKQ9BYG3 293 aaKnown RBP13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 IGFLR1Q9H665 355 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 ATP6V0A4Q9HBG4 840 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 FAM50BQ9Y247 325 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 PCDHB12Q9Y5F1 795 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 ARID2Q68CP9 1835 aa13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 SPTBN5Q9NRC6 3674 aaKnown RBP13.94□□□□□ -0.18
PDGFRA-204ENST00000504461 BRWD1Q9NSI6 2320 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 H3BQ06 376 aaPredicted RBP13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 CCNT1O60563 726 aaKnown RBP13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 JAK2O60674 1132 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 CDC42EP1Q00587 391 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 ST3GAL1Q11201 340 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 FAM102BQ5T8I3 360 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 PIK3AP1Q6ZUJ8 805 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 LINC01465Q8N7H1 131 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 ETNPPLQ8TBG4 499 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 SPPL3Q8TCT6 385 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 NEK9Q8TD19 979 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 NLRP7Q8WX94 980 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 ZNF668Q96K58 619 aaPredicted RBP13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 FAM20AQ96MK3 541 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 C1QTNF1Q9BXJ1 281 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 ADAMTS10Q9H324 1103 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 ELAC1Q9H777 363 aaKnown RBP13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 TMEM161AQ9NX61 479 aa13.93□□□□□ -0.18
PDGFRA-204ENST00000504461 MYO7AQ13402 2215 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 GRXCR2A6NFK2 248 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 SLC37A4O43826 429 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 DKC1O60832 514 aaKnown RBP eCLIP13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 DTNBO60941 627 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 BAG4O95429 457 aaKnown RBP13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 ITGB1P05556 798 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 GCFC2P16383 781 aaKnown RBP13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 KRT2P35908 639 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 GPC3P51654 580 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 PSMC5P62195 406 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 FAM189BP81408 668 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 HYAL1Q12794 435 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 DSC3Q14574 896 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 TARBP2Q15633 366 aaKnown RBP13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 PPP4R3AQ6IN85 833 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 POF1BQ8WVV4 589 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 GCOM2Q9BZD3 368 aaPredicted RBP13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 GJB4Q9NTQ9 266 aa13.92□□□□□ -0.18
PDGFRA-204ENST00000504461 H3BQV1 296 aa13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 HOXA2O43364 376 aa13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 FGFR1P11362 822 aa13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 DARSP14868 501 aaKnown RBP13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 IL9P15248 144 aa13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 GJB2P29033 226 aa13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 SSTR3P32745 418 aaPredicted RBP13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 QARSP47897 775 aaKnown RBP13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 LARP1BQ659C4 914 aaKnown RBP13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 B3GNT9Q6UX72 402 aa13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 FAM178BQ8IXR5 827 aa13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 ABI1Q8IZP0 508 aa13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 OXER1Q8TDS5 423 aa13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 MICAL1Q8TDZ2 1067 aa13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 JPH2Q9BR39 696 aaPredicted RBP13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 SH2D3AQ9BRG2 576 aa13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 FOXP1Q9H334 677 aaPredicted RBP13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 TYW1Q9NV66 732 aaKnown RBP13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 XIRP2A4UGR9 3374 aa13.91□□□□□ -0.18
PDGFRA-204ENST00000504461 TMEM150BA6NC51 233 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 TBX3O15119 743 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 P4HBP07237 508 aaKnown RBP13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 COL9A1P20849 921 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 FGFR4P22455 802 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 DNAJB1P25685 340 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 PPP2R5CQ13362 524 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 GNL2Q13823 731 aaKnown RBP13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 CAMK1Q14012 370 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 COL19A1Q14993 1142 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 CSPP1Q1MSJ5 1256 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 RHPN2Q8IUC4 686 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 EXOC8Q8IYI6 725 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 THNSL1Q8IYQ7 743 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 GJD3Q8N144 294 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 RNF169Q8NCN4 708 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 INO80BQ9C086 356 aaPredicted RBP13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 TMEM117Q9H0C3 514 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 KCNMB3Q9NPA1 279 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 DACT1Q9NYF0 836 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 SUCLA2Q9P2R7 463 aaPredicted RBP13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 NCOR1O75376 2440 aa13.9□□□□□ -0.18
PDGFRA-204ENST00000504461 TTC28Q96AY4 2481 aa13.89□□□□□ -0.19
PDGFRA-204ENST00000504461 A0A087WZ62 844 aa13.89□□□□□ -0.19
PDGFRA-204ENST00000504461 EML1O00423 815 aa13.89□□□□□ -0.19
PDGFRA-204ENST00000504461 MAFO75444 373 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms