RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 GPR182O15218 404 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 USO1O60763 962 aaKnown RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 CSDE1O75534 798 aaKnown RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 UPP2O95045 317 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 SRGAP2CP0DJJ0 459 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 EIF4BP23588 611 aaKnown RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 DNAJB2P25686 324 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 MARCKSP29966 332 aaPredicted RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 GPC3P51654 580 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 PKP1Q13835 747 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 PTPAQ15257 358 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 RAB30Q15771 203 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 ECM1Q16610 540 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 FOXD4L6Q3SYB3 417 aaPredicted RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 ODR4Q5SWX8 454 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 GPR153Q6NV75 609 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 FAM117BQ6P1L5 589 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 FOXD4L3Q6VB84 417 aaPredicted RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 MAEAQ7L5Y9 396 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 KSR1Q8IVT5 923 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 HERC6Q8IVU3 1022 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 TCP11Q8WWU5 503 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 PRPF31Q8WWY3 499 aaKnown RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 PSPC1Q8WXF1 523 aaKnown RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 TIFAQ96CG3 184 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 AK8Q96MA6 479 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 NLRP4Q96MN2 994 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 ZNF396Q96N95 335 aaPredicted RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 USP28Q96RU2 1077 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 FDXACB1Q9BRP7 624 aaPredicted RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 MMTAG2Q9BU76 263 aaKnown RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 FTHL17Q9BXU8 183 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 GCOM2Q9BZD3 368 aaPredicted RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 ATP6V0A4Q9HBG4 840 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 TFIP11Q9UBB9 837 aaKnown RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 DBR1Q9UK59 544 aaKnown RBP8.13□□□□□ -1.11
USP46-203ENST00000502443 ST3GAL5Q9UNP4 418 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 PCDHA11Q9Y5I1 949 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 COL4A3BPQ9Y5P4 624 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 PTPRSQ13332 1948 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 MYH15Q9Y2K3 1946 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 DENND3A2RUS2 1198 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 ARHGEF35A5YM69 484 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 E9PMD0 336 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 ENPP3O14638 875 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 ASAP2O43150 1006 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 TLL1O43897 1013 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 GJB5O95377 273 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 F13A1P00488 732 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 DARSP14868 501 aaKnown RBP8.12□□□□□ -1.11
USP46-203ENST00000502443 MYOGP15173 224 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 LONP1P36776 959 aaKnown RBP8.12□□□□□ -1.11
USP46-203ENST00000502443 UBA7P41226 1012 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 GRIN1Q05586 938 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 LAMTOR4Q0VGL1 99 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 MXD4Q14582 209 aaPredicted RBP8.12□□□□□ -1.11
USP46-203ENST00000502443 ZNF697Q5TEC3 545 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 PADI6Q6TGC4 694 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 Q7L0L9 218 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 CABP7Q86V35 215 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 ZNF410Q86VK4 478 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 FAM228AQ86W67 206 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 DEFB123Q8N688 67 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 TOP1MTQ969P6 601 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 CDK5RAP3Q96JB5 506 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 FAM161BQ96MY7 647 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 PLIN2Q99541 437 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 INO80BQ9C086 356 aaPredicted RBP8.12□□□□□ -1.11
USP46-203ENST00000502443 NT5C3AQ9H0P0 336 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 BHMT2Q9H2M3 363 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 NKX2-4Q9H2Z4 354 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 TMX1Q9H3N1 280 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 SLC28A3Q9HAS3 691 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 ERVK-5Q9HDB9 667 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 XPNPEP1Q9NQW7 623 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 DAXXQ9UER7 740 aaPredicted RBP8.12□□□□□ -1.11
USP46-203ENST00000502443 DNM3Q9UQ16 869 aa8.12□□□□□ -1.11
USP46-203ENST00000502443 YBX2Q9Y2T7 364 aaKnown RBP8.12□□□□□ -1.11
USP46-203ENST00000502443 MGEA5O60502 916 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 EYA4O95677 639 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 SSBP05455 408 aaKnown RBP eCLIP8.11□□□□□ -1.11
USP46-203ENST00000502443 CA3P07451 260 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 ZSCAN20P17040 1043 aaPredicted RBP8.11□□□□□ -1.11
USP46-203ENST00000502443 CYP11B2P19099 503 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 IBSPP21815 317 aaPredicted RBP8.11□□□□□ -1.11
USP46-203ENST00000502443 FGFR4P22455 802 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 SFPQP23246 707 aaKnown RBP eCLIP8.11□□□□□ -1.11
USP46-203ENST00000502443 ARL2P36404 184 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 GRB10Q13322 594 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 TFDP1Q14186 410 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 SLC39A14Q15043 492 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 STK38Q15208 465 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 SPECC1Q5M775 1068 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 HYIQ5T013 277 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 FAM102BQ5T8I3 360 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 RTN4RL1Q86UN2 441 aaPredicted RBP8.11□□□□□ -1.11
USP46-203ENST00000502443 RNF149Q8NC42 400 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 MCPH1Q8NEM0 835 aa8.11□□□□□ -1.11
USP46-203ENST00000502443 RASSF8Q8NHQ8 419 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms